KEGG   Sus scrofa (pig): 100625395
Entry
100625395         CDS       T01009                                 
Symbol
USP35
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 35
  KO
K11854  ubiquitin carboxyl-terminal hydrolase 35/38 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100625395 (USP35)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100625395 (USP35)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100625395 (USP35)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100625395 (USP35)
Ubiquitin system [BR:ssc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100625395 (USP35)
SSDB
Motif
Pfam: Usp38-like_N UCH UCH_1 Med16_bridge DUF4746 Pox_Ag35
Other DBs
NCBI-GeneID: 100625395
NCBI-ProteinID: XP_013834638
Ensembl: ENSSSCG00000014892
Position
9:12586028..12662958
AA seq 1011 aa
MDKILEAVVTSSYPASVKQGLVRRVLEAARQPLEREQCLALLALGARLYVGGADELPRRV
GCQLLHVAGRHHPEVFAEFFSARRVLRLLQGGAGPPGARALACVQLGLQLLPEGPAADEV
FALLRREVLRTVCERPGPAACAQVARLLARHPRCIPDGPHRLLFCQQLVRSLGRFRCPAE
GEEGAVEFLEQAQQVSGLLAQLWRAQPAAILPCLKELFAVISCTEEEPPSSALASVVQHL
PLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGLAAVKKFS
ILIEVSLAKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVK
EDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTS
QKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPL
MTKLQWLFAFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGT
RICQKLKQSSSPSAPEEPPSPSSTSVEKMFGGKIVTRICCLRCLNVSSREEAFTDLSLAF
PPAERCRRRRLGSVMLPPEEVGPRDXPLPSRAQGPGKVGPRRQRKHCITADVPPAILDMA
GLGHQGPGGQSLQEEKGEKEERAEEEEETREGEDEREKGEPKGEEEEEEEEKEAEEKEKK
EEVMEKKVEKEADSLGPGTLRNAAVPSAEGSRSVLDLVNYFLSPEKLTAENRYHCESCAS
LQDAEKVVELSQGPRYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDL
CSVVVHSGVSSESGHYYCYAREGAARPAPSLGAADRPEPDNQWYLFNDTRVSFSSFESVS
NVTSFFPKDTAYVLFYRQRPGEGPEAEPGSPRARAEPALHKDLMEAISKDNILYLQEQEK
EARSRAAYISALPASPHWGRGFDEDKDEDEGPPGGCNPAGGNGGDFHRLVF
NT seq 3036 nt   +upstreamnt  +downstreamnt
atggacaagatcctggaggcggtggtgacgtcgtcatacccagcgagcgtgaagcaagga
ctggtgcggcgcgtgctggaggcggcgcggcagccactggagcgggagcaatgcctggcg
ttgctggcgctgggcgcgcgcctctacgtgggtggcgccgacgagctgccgcgccgcgtg
ggctgccagctgctgcacgtggccggccgtcaccacccggaagtcttcgcagagtttttt
agcgcgcgccgcgtgctgcgcctgctgcaggggggcgccgggccgccgggcgcccgcgcg
ctggcctgcgtgcagctcggcctgcagttgttgcccgaagggccggcagccgacgaggtg
ttcgcgctgctgcggcgcgaggtgctacgcaccgtgtgcgagcgcccggggcccgcggcc
tgtgcgcaggtggcccggttgctggcgcgccacccacgctgcatccccgacggcccgcac
cgcctgctcttctgccagcagctggtgcgctccctgggccgttttcgttgcccggccgag
ggcgaggagggcgcggtggagttcctggagcaggcccagcaggtgagcgggctcctggcg
cagctgtggcgagctcaacccgccgccatcctgccctgcctcaaggagctgttcgccgtc
atctcctgcacagaggaggagccgccatctagtgccttggccagtgtggtccagcacctc
ccattggaactcatggatggtgtcgtccggaacctcagcaatgatgacagtgtgacggac
tcccagatgctgactgctatcagcaggatgatcgactgggtgtcctggcccctggggaag
aacattgacaagtggatcattgcactgctgaagggcctggcggctgttaagaagttcagc
atcttgatcgaggtttcactcgccaaaatcgagaaggttttctccaagctcctgtaccct
attgtccggggagctgccttgtctgtcctcaagtacatgctcctgaccttccagcactcc
catgaggccttccacctgctcctccctcatatcccgccaatggtggcctctctggtcaag
gaggactccaactcggggaccagctgcctggagcaactggcggagctggtccattgcatg
gtgttccggttcccgggcttcccggatctgtacgaacctgtcatggaggccatcaaggac
cttcatgttcccaatgaggatcgaatcaagcagctgctggggcaggatgcctggacctcg
cagaagagtgagctggctggcttctacccccggctcatggccaagtcagacacgggcaag
attggtttaatcaatctgggcaacacgtgctacgtgaacagcatccttcaggccttgttc
atggcttctgatttcagacactgtgtgctccgtttgaccgagaacaactcgcagcccttg
atgaccaagttgcagtggctctttgccttcctggagcacagccaacggcctgccatttct
ccagagaacttcctgtctgcctcctggacaccctggttcagccccggcacccagcaggac
tgttcagagtacctgaagtacctgctggatcggctgcacgaggaggagaaaaccgggacg
aggatctgccagaagctcaagcagtccagctcgccctccgcgcccgaggagccccccagc
ccgagctcaacgtccgtggagaagatgttcggaggcaagattgtgactcggatctgctgt
ctccgctgcctcaacgtctcctccagggaggaggccttcacagacctctctctggccttt
cccccagccgagcgctgccgccgccgccgcctgggctcagtgatgctccctccagaagag
gtcggcccccgggacncccctctgccgtcccgagcccaggggccaggcaaggtgggtcct
cggaggcagaggaaacactgcatcacagccgatgtcccccccgccatcctggacatggca
ggcctgggccaccagggacccggcgggcagagccttcaggaggagaagggggagaaggag
gagcgagcagaggaggaggaggagaccagagagggagaggacgagcgagagaagggagag
ccgaagggggaagaggaagaagaggaggaggagaaggaggcggaggagaaggagaagaag
gaggaggtgatggagaagaaggtggagaaggaggccgacagtctgggcccggggaccctc
aggaatgccgccgtgccctctgcagagggctcccgctctgtgctggacctggtcaactac
ttcctgtcgccggagaagctgacggccgagaaccgctaccactgcgagtcgtgcgcctcc
ctgcaggacgccgagaaggtggtggagctgagccaggggccgcgctacctcatcctgacg
ctgctgcgcttctccttcgacctgcgcaccatgcggcgccgcaagatcctggacgacgtc
tccatcccgctgctgctgcgcctgcccctggcggggggccggggccaggcctacgacctc
tgcagcgtcgtggtgcactcgggggtgtcctcggagagcggccactactactgctacgcc
cgcgagggcgcggcccggccagccccgagcttgggcgcggccgacaggcccgagcccgac
aaccagtggtacctgttcaacgacacccgggtgtctttctcctcctttgagtctgtcagc
aatgtcacctccttcttccccaaggacacggcctacgtgctcttttaccggcagcggcct
ggggaggggcccgaggctgagcctggctccccccgggcccgggccgagcccgccctccac
aaagacttgatggaagccatctccaaagacaacatcctttacctgcaggagcaggagaag
gaggcacggagcagggcggcctacatctctgcgctcccggcatccccgcactggggccgg
ggctttgatgaagacaaagacgaggatgaaggccctccggggggctgcaaccctgcaggt
ggcaacggcggtgacttccacagactcgtcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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