KEGG   Sus scrofa (pig): 100628048
Entry
100628048         CDS       T01009                                 
Symbol
STX5
Name
(RefSeq) syntaxin-5
  KO
K08490  syntaxin 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100628048 (STX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100628048 (STX5)
Membrane trafficking [BR:ssc04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    100628048 (STX5)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Syntaxin Apolipoprotein SKA1 Vac_Fusion DUF5063 DUF16 MCPsignal DUF1664
Other DBs
NCBI-GeneID: 100628048
NCBI-ProteinID: NP_001230310
Ensembl: ENSSSCG00000026293
UniProt: A0A4X1VLE6 A0A4X1VMS1
Position
2:8937705..8968513
AA seq 355 aa
MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVALAPPPPDTMSCRDR
TQEFLSACKSLQSRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGAVVLGAESRAS
GDVAIDMMDSRTSQQLQLIDEQDSYIQTRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatcccgcggaaacgctacgggtctaagaacacggatcagggtgtctacctgggtctc
tcaaagacgcaggtcctgtcccctgcaactgctggcagtagcagcagcgacatcgcccct
ctgccccccccagtggccctggcccctccccctcccgacaccatgtcctgccgggatcgg
acccaggaattcctgtctgcctgcaagtccctgcagagtcgtcagaatggaatccagaca
aacaagccagctctgcgggctgtccggcagcgcagtgaattcaccctcatggccaagcgc
attggcaaagacctcagcaacacctttgccaagctggagaagctgacaatcctggccaag
cgcaagtccctctttgatgataaagcagtggaaatcgaggagctaacttatatcatcaaa
caggacatcaatagcctcaacaagcaaatcgcccagcttcaggatttcgtgagagccaag
ggcagccagagcggccggcacctgcagacgcattccaacaccattgtggtctccctgcag
tcgaagctggcctccatgtccaatgacttcaaatcagttttggaagtgaggacagagaac
ctgaagcagcagaggagccggcgggagcagttctcccgggcacccgtgtcagccctgccc
ctcgcgcccaaccacctcgggggcggtgctgtggttttgggggcagagtcccgagcctct
ggggacgtggccattgacatgatggattctaggaccagccagcagctgcagctcattgat
gagcaggactcctacatccagacccgggcagacaccatgcagaacattgagtccacaatt
gtggagcttggctccatcttccagcagttggcacacatggttaaggaacaggaagaaacc
attcagaggatcgacgagaacgtgctaggagcccagctggacgttgaggccgcccactcg
gagatcctcaagtacttccagtcggtcacgtccaaccggtggcttatggtcaaaatcttc
ctcatcctcattgtcttcttcatcatcttcgtggtcttccttgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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