KEGG   Sus scrofa (pig): 100738761
Entry
100738761         CDS       T01009                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100738761 (KDM4B)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100738761 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100738761 (KDM4B)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100738761 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 LBR_tudor
Other DBs
NCBI-GeneID: 100738761
NCBI-ProteinID: XP_020939688
Ensembl: ENSSSCG00000024570
Position
2:complement(73746379..73889881)
AA seq 1116 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALSSPELSTWSA
SRASLKAKLLRRQISLKENRHWKKTEEERKPNLERKKEQTRKPGLSSHRKRSQPKKPKPD
DPKSPGEGAAGAAILEEAGGGVKEEAALEADPEEEEEEPQSLPQGRDAEGAEEDGRGKLR
PAKSKSERKKKSCGPLHPHQLPPPLPPQFPMEEAPLLESPAPAPGPEATEESPPPPPLNV
VPPEAPGEEPEAKPRPIIPMLYVVPRPGPTTGDKGRVSCQQASEHFAQKGPTWKEQVAPM
ELTGPEEESGAGEVQAPATFSKLKMEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPF
SGDEDVGDPEALRSLLSLQWKNKAANFQAERKFNAAAALTEPYCAICTLFYPYSQSLQTE
KETPQASLGEGPSATPPSKSGQKTRPLIPEMCFISSGENTEPLPANSYIGDDGTSLLIAC
AKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGALQMTTDRRWIHVIC
AIAVPEVRFLNVMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSCEHCSTSFHV
TCAHAAGVLMEPDDWPYVVSITCFKHKSGSHNVQVLRAVSLGQVVITKNRNGLYYRCRVI
GTTTQTFYEVNFDDGSYSDNLYPESITSRDCVRLGPPPEGEFVELRWTDGNIYRAKFISS
VTSHIYQVEFEDGSQLTVKRGDLFTLDEELPKRVRSRLSVSTGAPQENVFSGEEVKAAKR
PRVGTPRAAEDSGRNPDYLAFMESLLQAQCRPGASF
NT seq 3351 nt   +upstreamnt  +downstreamnt
atggggtctgaggatcacggggcccagaacccgagttgtaaaatcatgacatttcgccca
accatggaggagtttaaggacttcaacaaatacgtggcctacatcgagtcccagggagcc
caccgcgcaggcctggccaagatcatccccccgaaagagtggaagccacggcagacgtac
gacgacatcgatgatgtggtcatcccggcccccatccagcaggtggtgacgggccagtca
ggcctcttcacgcagtacaacatccagaagaaggccatgaccgtcggcgagtaccgccgc
ctggccaacagcgagaagtactgcaccccgcggcaccaggactttgacgacctggaacga
aagtactggaagaatctcacctttgtgtcacccatctacggggcagacatcagtggctcc
ttgtacgatgacgacgtggcccagtggaacatcgggaacctgcggaccatcctggacatg
gtggagcgcgagtgcggcacgatcatcgagggcgtcaacaccccctacctgtactttggc
atgtggaagaccaccttcgcctggcacacggaggacatggacctgtacagcatcaactac
ctgcactttggggagcccaagtcatggtatgccatcccgccagagcatggcaagcgcctg
gagcgactagcaatcggcttcttccccgggagctcccagggctgcgatgccttccttcgg
cacaagatgaccctcatctcacccattatcctcaagaagtatgggatcccgtttagccgg
atcacgcaggaggcgggagaattcatgatcacctttccctacggctaccacgccggattc
aatcacggattcaactgcgcagaatctaccaacttcgccaccctgcggtggattgattac
ggcaaggtggccacacagtgcacatgccggaaggacatggtcaagatctccatggacgtc
ttcgtgcgcatcctgcagccggagcgctacgagctgtggaagcagggcaaagacctcacg
gtgctggaccatacccggcccacggccctgagcagccccgagctgagcacctggagcgcc
tcccgggcctcgctcaaggccaagctcctccgcagacaaattagtctgaaagaaaacaga
cactggaaaaagactgaggaggagagaaaacccaatctagagaggaagaaagagcagacc
aggaagccggggctgtcgtcacaccggaaacggagccagcccaagaagcccaagccggat
gaccccaagtctcctggtgagggggcagctggggcagccatcctggaggaggccggtggc
ggagtgaaggaggaggccgcactggaggccgaccccgaggaggaggaggaggaaccccag
tcgctgccgcagggccgggatgccgagggcgccgaagaggacgggcggggcaaactgcgg
ccggccaagtccaagagcgagcggaagaagaagagctgcggccccctgcacccccaccag
ctgccgccgcccctgcccccccagttccccatggaggaggcacccctgctggagtccccc
gcgccagcacccggccctgaggccactgaggagagccccccgccaccgcccctcaatgtg
gtgccccctgaggcgcctggcgaggagccagaggcgaagccacgccccatcatccccatg
ctgtacgtggtgccacggcccggccccacgacgggtgacaagggccgcgtgtcctgccag
caggcctctgagcactttgcccagaagggccctacctggaaggagcaggtggctcccatg
gagctaacagggcctgaggaggagagcggagctggcgaggtgcaggctccagcgactttt
tccaagttgaagatggagattaagaagagccggcgccaccctctgggcaggccgcccacc
cggtccccgctgtctgtggtcaagcaggaggcctccagtgatgaggaagccttccctttc
tctggggatgaggacgtgggtgaccctgaggccttgaggtctttgctgtccctgcagtgg
aagaacaaggcagccaacttccaggccgagaggaagttcaatgcggcggccgccctgacg
gagccctactgcgccatctgtactctcttctacccatacagccagtccctacagaccgag
aaggagactccccaggcctccctcggggagggcccttcggccacaccgccttccaaaagt
ggccagaagacacggccgctgatccccgagatgtgcttcatctccagcggcgaaaacaca
gagccactccccgccaactcgtacatcggtgacgacggaaccagcctgctgatcgcctgt
gccaagtgctgcctgcaggtccacgccagttgctacggcatccgccctgagctggtcaat
gagggctggacgtgttcccggtgcgcggcccacgcctggactgcggagtgctgcctgtgc
aacctccgcggaggagccctgcagatgacgacggacaggaggtggatccacgtgatctgc
gccattgccgtccccgaagtgcggttcctgaacgtgatggagcgccaccccgtggacatc
agcgccatccccgagcagcggtggaagctgaaatgtgtgtactgtcggaagcggatgaag
aaggtgtctggcgcctgcatccagtgctcctgcgagcactgctccacctccttccatgtg
acctgtgcccacgccgccggcgtcctcatggagccagatgactggccctacgtcgtctcc
atcacctgcttcaagcacaagtcagggagccacaacgtccaggtcctgagggccgtgtcc
ttaggccaggtggtcatcaccaagaaccgcaacgggctttactaccggtgccgtgtcatt
ggcaccaccacgcagaccttctacgaagtgaactttgacgatgggtcctacagcgacaac
ctgtacccagagagcatcactagtagagactgtgtccggctgggacccccgcccgagggc
gagtttgttgagctccggtggactgacggcaacatctacagggccaagttcatttcctca
gtgaccagtcacatctaccaggtggaattcgaggacgggtcccagctgacagtgaagcgt
ggcgacctcttcacgctggacgaggagctccccaagagggtccggtcgcgcctatcggtc
agcaccggggccccacaggaaaacgtcttctcgggagaggaggtgaaggccgccaagcgc
ccgcgggtgggcacccctcgcgccgcagaggactcggggcggaacccggactacctggcc
ttcatggagagcctcctgcaggctcagtgccggcccggagcctccttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (58)   

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