KEGG   Sus scrofa (pig): 100739498
Entry
100739498         CDS       T01009                                 
Name
(RefSeq) protocadherin beta-17-like
  KO
K16494  protocadherin beta
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100739498
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Protocadherins
   100739498
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 Cadherin_4
Other DBs
NCBI-GeneID: 100739498
NCBI-ProteinID: XP_013850707
Position
2:142873080..142877989
AA seq 802 aa
METLLPKATQKRQVTAILLLFLLWEAGGATIKYSVLEERDSGSVVANLAEDLGLGLGELA
ARGARILSKGNKQHLQLEQKSGNLLLKEKLDREELCGDTDPCILPFQLLLKNPVQFIQGE
LQLQDVNDHAPDFLENEILLKISESSQPGTAFPLKIAQDLDVGSNTVQNYTISTNFHFHL
FTRNHSNGRKYPELVLDKELDHEEQPELRLTLTALDGGSPPKSGTSQVLIMVLDINDNTP
EFVQQFYKVQVPENRPIGSLVITVSARDLDAGTYGELSYSFFQSSNQVIQTFEVNTVTGD
IRLKKMLDFEEIQSYDMEIEASDGGGLTGKCTVVIEVTDVNDNAPELTMSLLINDIPENT
PDTVVAVFGISDPDAGDNGKMLCSIQDHLPFLLKRTVENFYTLVTQGALDREERAEYNIT
ISVSDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRENNSPALHIGTVRATDADA
GANAQLTYSLLPPSDPHLPLASLVAINPDTGQLFALRALDYEALRAFDFQVRAADRGAPA
LSSQARVRVLVADANDHAPVVLYPPPNASAPCTELLPRAAEPGYLLAKVVAVDGDAGQNA
WLSYRLLQATEPGLFGVGAHSGEVRTARPLSERDAPRQRLLLLVRDHGEPPLSASVPLHV
LLVDGFSQPYLPPPEAPGRAPGAGAGADEPLTVALVGALACVSALLVGALLALAAGRLCR
RGGAASAGGCAGPAEGGVPGQLLDVGGTGTLAHGYRYEVCLAGGTGTSEFKFLKPVVPNF
MSEGPGRDMEENSDLRNHFGFS
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggagacgctgctacccaaagcgacgcagaaaaggcaagtgaccgccattcttcttcta
tttctgttgtgggaggcgggcggtgcgaccattaagtattccgttctagaagaaagggac
agcggctcagttgtggccaacctagcagaagatctggggttgggcttaggggagctggcc
gcgcggggcgcccggattctttccaaagggaataaacagcatttgcagctcgagcagaag
agcgggaatttgctcctaaaagaaaaactggaccgggaagagctgtgcggtgacacagat
ccatgtatactgcctttccagctgttactgaaaaacccggtgcagtttattcagggcgaa
ttacagctccaagacgtaaatgatcacgccccagactttttggaaaacgaaatcctcctg
aaaatctcggaaagcagccaaccagggacagcatttcctttgaaaatagctcaagattta
gatgtgggcagtaacacagttcagaactacacaattagcaccaacttccattttcacctt
ttcactcgaaatcacagcaatggcaggaaatacccagagctggtgctggacaaagagctg
gaccatgaggagcagccagagctcaggttaactctcacggcgctggatggtggatcgcca
cccaagtctgggacgtcccaggttctcatcatggtcctggacataaatgacaacacccct
gaatttgttcagcagttttacaaggtgcaggtcccagagaacagacccataggctccctc
gtcatcacagtctctgctagggatttggatgctggaacttacggagagctctcctactca
tttttccaatcctcaaatcaggtcattcagaccttcgaagtcaacacagtcacaggggat
attcgattaaaaaaaatgttggattttgaggaaattcaatcttacgatatggaaattgag
gcctcagatggcgggggtcttacaggaaaatgcaccgtagtcatagaagtgacggatgta
aatgacaatgctcctgaattgactatgtcgttactcatcaatgatatcccagaaaacacc
cccgacactgtcgtcgctgtattcggaatttcagacccagacgctggagacaatggcaaa
atgctgtgctccattcaagaccatcttcccttccttctgaaacgtactgtagaaaacttc
tacaccctggtaacacaaggagcgctggaccgagaggaaagagccgagtacaacatcacc
atcagcgtcagcgacctggggaccccccggcggcacacccagcacaacctgacggtgcgc
gtggccgacgtcaacgacaacgcgcccgccttcagccagcccgcctacaccctgcgggtc
cgcgagaacaacagccccgccctgcacatcggcaccgtccgcgccaccgacgccgacgcg
ggcgccaacgcccagctcacctactcgctgctgccgccctccgacccgcacctgcccctc
gcctcgctcgtggccatcaaccccgacaccggccagctcttcgccctgcgcgccctcgac
tacgaggccctgcgcgccttcgacttccaggtgcgcgccgccgaccgcggcgcgcccgcg
ctcagcagccaggcgcgggtgcgcgtgctcgtggccgacgccaacgaccacgcgcccgtc
gtgctctacccgccgcccaacgcctcggcgccctgcaccgagctgctgccccgggcggcc
gagccgggctacctgctcgccaaggtggtggcggtggacggcgacgcgggccagaacgcc
tggctgtcctaccggctgctgcaggccaccgagcccgggctcttcggcgtgggcgcgcac
agcggcgaggtgcgcacggcccggccgctgagcgagcgcgacgcgccccggcagcggctg
ctgctgctggtgcgggaccacggcgagccgccgctctcggccagcgtcccgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgccgcccgaggcccccggccgggcg
ccgggcgccggcgccggcgcggacgagccgctcaccgtcgccctggtgggggcgctggcg
tgcgtgtcggcgctgctggtgggggcgctgctggccttggcggcggggcggctgtgccgg
cggggcggggcggcctcggcggggggctgcgcggggcccgcggagggcggcgtcccgggc
cagctgctggacgtgggcggcacgggcaccctggcccacggctaccgctacgaggtgtgt
ctggcggggggcactgggaccagcgagttcaagtttctcaaacctgttgttcccaatttc
atgagtgaagggcctggtagggacatggaggaaaactctgacttaagaaatcattttgga
ttcagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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