KEGG   Sus scrofa (pig): 397018
Entry
397018            CDS       T01009                                 
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
  KO
K13885  scavenger receptor class B, member 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04145  Phagosome
ssc04913  Ovarian steroidogenesis
ssc04925  Aldosterone synthesis and secretion
ssc04927  Cortisol synthesis and secretion
ssc04934  Cushing syndrome
ssc04975  Fat digestion and absorption
ssc04976  Bile secretion
ssc04977  Vitamin digestion and absorption
ssc04979  Cholesterol metabolism
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    397018 (SCARB1)
 09150 Organismal Systems
  09152 Endocrine system
   04913 Ovarian steroidogenesis
    397018 (SCARB1)
   04925 Aldosterone synthesis and secretion
    397018 (SCARB1)
   04927 Cortisol synthesis and secretion
    397018 (SCARB1)
  09154 Digestive system
   04976 Bile secretion
    397018 (SCARB1)
   04975 Fat digestion and absorption
    397018 (SCARB1)
   04979 Cholesterol metabolism
    397018 (SCARB1)
   04977 Vitamin digestion and absorption
    397018 (SCARB1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    397018 (SCARB1)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    397018 (SCARB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    397018 (SCARB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    397018 (SCARB1)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    397018 (SCARB1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   397018 (SCARB1)
SSDB
Motif
Pfam: CD36 SHR3_chaperone
Other DBs
NCBI-GeneID: 397018
NCBI-ProteinID: NP_999132
Ensembl: ENSSSCG00000009759
UniProt: Q8SQC1 A0A481C9Z2
Position
14:28301421..28393568
AA seq 509 aa
MGSRSRARQVAAALGFVGLLLAALGAVMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIP
VPFYLSVYFFDVINPNEILQGQKPQVRERGPYVYREFRHKSNITFNDNDTVSFLEYRSYQ
FQPHKSRGLESDYIVIPNILVLSASVMMEDRPMSLKLIMTFAFSALGERAFVNRTVGEIM
WGYEDPLIHLINKYFPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKDFSRIHLVDKWNGL
SKVNFWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFR
FVAPNTLFANGSVYPPNEGFCPCMESGIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSG
LHPNTEEHSLFLDIHPVTGIPMNCSVKLQLSLYIKSVKGIGQTGKIEPVVLPLLWFAESG
AMEGETLQTFYTQLVLMPKVLHYAQYVLLALGCVLLFIPIVYQIRSQEKCYLFWSSSKKG
SKDKEAIQAYSESLMTPAPKGTVLQEARL
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgggcagccgctccagagcgcgccaggtggccgcggcgctgggcttcgttgggctgctc
ttagctgcactgggcgctgttatgatcgtgatggtgccctcgatcatcaagcagcaggtc
ctcaagaatgtgcgcatcgaccccagcagcctgtccttcaacatgtggaaggagatccct
gtccctttctacctctccgtctacttctttgatgtcatcaaccccaacgagatcctccag
ggccagaagccacaggtgcgggagcgcgggccctacgtgtacagggagttcaggcacaag
agcaacatcaccttcaacgacaacgacacagtgtccttcctcgagtaccgcagttaccag
ttccagcctcacaagtcccgcggcctggagagtgactacatcgtcatacccaacatcctg
gtcctgagcgcgtcagtgatgatggaggataggcccatgagcctgaagctgatcatgacc
tttgcattcagtgcccttggcgagcgcgccttcgtgaaccgcactgttggtgagattatg
tggggctacgaggaccccctcatacatctcatcaataagtacttccccaacatgttcccc
ttcaagggcaagttcgggttatttgctgagctcaacaactccgattccgggctcttcacc
gtgttcacaggggtcaaagacttcagcaggatccaccttgtagacaagtggaatgggctc
agcaaggtcaacttctggcattccgatcagtgcaacatgattaatggaacttccgggcag
atgtgggcaccatttatgactcccgaatcctctctggagttctacagccccgaggcctgc
cggtccatgaagctcatctacaaggagcagggggtgtttgaaggcatccccacctttcgt
ttcgtggctcccaacaccttattcgccaatggctctgtctacccacccaatgagggcttt
tgcccgtgcatggagtctggaattcagaatgttagcacctgcaggttcaatgcacccttg
tttctctcccatcctcacttctacaatgctgacccagttctggcagaggcagtgtctggc
ctccaccctaacacagaagagcattccttgttcctggacattcatccggtcaccgggatc
cctatgaactgctctgtgaagcttcagctgagtctctacattaagtctgtgaaaggcatt
ggacaaaccgggaagattgaaccggtggtcctgccgctgctgtggtttgcagagagcggg
gcaatggagggggagacccttcagacattctacactcagctggtgttgatgcccaaggtg
ctgcactatgcccagtacgtgctccttgctctgggctgcgtcctgctgttcatccccatc
gtctaccagatccggagccaagagaaatgctatttattttggagtagtagtaaaaagggc
tcaaaggataaggaggccattcaggcctattctgaatccctgatgacaccagctcccaag
ggaactgtactgcaagaagcaagactgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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