KEGG   Sus scrofa (pig): 397366
Entry
397366            CDS       T01009                                 
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
  KO
K04948  cyclic nucleotide gated channel alpha 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04022  cGMP-PKG signaling pathway
ssc04024  cAMP signaling pathway
ssc04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    397366 (CNGA1)
   04022 cGMP-PKG signaling pathway
    397366 (CNGA1)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    397366 (CNGA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    397366 (CNGA1)
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   397366 (CNGA1)
SSDB
Motif
Pfam: Ion_trans CLZ cNMP_binding Ion_trans_2 Zip CDC45 NPR3 Sec62 DUF2207_C Tim54 DUF4746 SLC52_ribofla_tr RR_TM4-6 RNA_polI_A34 Vfa1
Other DBs
NCBI-GeneID: 397366
NCBI-ProteinID: XP_020956830
Ensembl: ENSSSCG00000024246
Position
8:complement(37896460..37968935)
AA seq 737 aa
MKTHGADLSSSLIQESNSALHIKESAGRARRENQGSYERFWKDIKLNMKKSIINTRHSFV
NIPNVIVPDIEKEIRRMENGACSSFSDDDDSASMFEESESETPHGRDSFRSNTYGKGQPS
QREQYLPGAIALFNVNNSSNKEQEPKEKKKKKKEKKSKLDDKTENKKDPEKKKKKEKDKD
KKKKEEEKGKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSD
YIEYWLIFDYLSDIVYLLDMFVRTRTGYLEQGLLVREELKLIDKYKSNLQFKLDVLSVIP
TDLLYFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIIIIIHWNA
CVYFSISKAIGFGNDTWVYPDVNDPDFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEY
VFVVADFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVI
KWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKL
QPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGS
KAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKCMLEEKGKQILMKDGLLDINIAN
AGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEQFLKPLTDPEFS
AIEGSVVESGPTDSTQD
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgaaaacgcatggagcagacctctcctcatccctcattcaggagtcaaactcagctctc
catatcaaggaatcggctggaagagcgaggagagaaaaccagggaagctacgagcgcttt
tggaaagatattaaattaaacatgaagaaaagtattattaacacccggcattcttttgta
aacattcccaatgtaatcgtaccagatattgaaaaggaaataagaaggatggaaaatgga
gcatgcagctccttttctgatgacgatgatagtgcctctatgtttgaagaatcagagagt
gaaaccccccatggaagggattcctttaggagtaatacatatggaaagggacaaccctca
cagagggagcagtacttgcctggagccattgcacttttcaatgttaacaacagcagcaat
aaggaacaagaaccaaaagaaaagaagaaaaagaaaaaagaaaagaagagcaagctagat
gataaaactgaaaataaaaaggacccagaaaagaaaaagaagaaagaaaaggacaaagac
aagaaaaagaaagaagaggagaaaggcaaagataagaaagaggaggagaagaaggaagtc
gtggttattgatccctcaggaaacacctattacaactggctgttttgcatcaccttacct
gttatgtacaactggaccatgattatcgctagagcatgttttgatgaacttcagtctgat
tacatagaatactggctcatttttgattatttatcagatatagtctatcttctcgatatg
tttgtacgaacaaggacaggttacctagaacaaggactgctggtgagggaagagcttaaa
ctcatagataaatataaatcaaacttgcaatttaaattggatgtcctatccgtgatacca
actgatctgctatattttaagctggggtggaactatccagaaattagattaaacagactg
ttgaggatctctcgaatgtttgagttcttccagagaacagagacaaggacaaactaccca
aacatcttcaggatctctaacctcgttatgtatatcatcatcatcatccattggaatgcg
tgcgtgtacttctctatttccaaagctattggatttggaaatgatacgtgggtctaccct
gatgttaacgatcctgattttggccgtttggctagaaaatatgtgtacagcctttactgg
tctacattgactctgactaccattggtgaaacaccacctccggtgagggattctgagtat
gtctttgtggtagctgatttcctaattggagtgttaatttttgctaccattgtcggtaac
attgggtctatgatttccaacatgaatgcggccagagcagaattccaagcaagaatcgat
gcgatcaagcaatacatgcattttcgaaatgtaagcaaagatatggaaaagagagttatt
aaatggtttgactatctctggaccaacaaaaaaacagtagatgagaaagaagtcttgaag
tatctacctgataaactaagagcagaaattgccattaacgttcacttagacacattaaaa
aaggtgcgtatttttgcagactgtgaggctggtctcttggtggagttggtcttgaaatta
cagccccaggtctacagtcctggagattatatttgcaagaaaggggatattggacgagag
atgtacattatcaaagaaggcaaacttgctgtggtggcagatgatggaatcacccagttt
gtggtattgagtgatggcagctactttggtgagatcagcatccttaacattaaaggcagt
aaagctggcaatcgaagaacagccaatattaaaagtattggctattcagatctgttctgt
ctctcgaaagatgacctcatggaagctctaaccgagtacccagatgctaaatgtatgcta
gaagagaaagggaagcaaatcttgatgaaagatggtctgctggatatcaatattgcaaat
gctggaagtgaccctaaagatctagaagagaaggtcacccgaatggaggggtcagtagac
ctcctgcaaacaaggtttgctcggatcctggctgagtatgagtccatgcagcagaaactg
aagcaaagactaacaaaggttgagcaatttctaaagccacttactgacccagaattttca
gctattgaaggatctgtagttgaaagtgggcccacagactcaacacaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (42)   

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