KEGG   Staphylococcus schleiferi 1360-13: LH95_05320
Entry
LH95_05320        CDS       T04012                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ssch  Staphylococcus schleiferi 1360-13
Pathway
ssch03030  DNA replication
ssch03430  Mismatch repair
ssch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LH95_05320
   03430 Mismatch repair
    LH95_05320
   03440 Homologous recombination
    LH95_05320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssch03032]
    LH95_05320
   03400 DNA repair and recombination proteins [BR:ssch03400]
    LH95_05320
Enzymes [BR:ssch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LH95_05320
DNA replication proteins [BR:ssch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LH95_05320
DNA repair and recombination proteins [BR:ssch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LH95_05320
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3
Other DBs
NCBI-ProteinID: AKS66888
Position
1126807..1129995
AA seq 1062 aa
MVAHLNIHTSYELLNSSITIKGAIARAIDIGYSAIAITDLNVMYGVPQFYDECTKKGIKP
LLGMTIYITDQLNVLEVVLIAKNNEGLKNLFQLSTDIQVNQREQVSIYDIQAYLQHNVVI
FKNMTEQTLHWLDEMPIESSYYVDHHSVVDRSIPQVYLESAYYLKAEDKETLKVLNAIRD
NTKVNFIDNEDGPSRHMFTINELSEAEIDAQYVKSTDEVADLCEAKLEYHQALLPEFQTP
DGSSADYYLWRVLEQSLQNKDLSKPNYIERLKYEYQVITKMGYADYFLIVSDLIRYAKSN
GVMVGPGRGSSAGSLVSYLLNITTIDPLKYDLLFERFLNPERVTMPDIDIDFEDTQREKV
IQYVQNKYGDYRVAGIVTFGHLLAKAVARDVGRVMGFDEATLSEASKLIPSKLGVTLDEA
YAQENFKAFVHRNHRNERWFEFCKKLEGLPRNTSTHAAGVIVNDQPLYESIPLTEGDTGL
LTQWTMTEAERIGLLKIDFLGLRNLTIIHQIIKQIKHDMKIDLNIEEIPFDDKEVFRLLS
RGDTTGIFQLESDGVRRVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYIRRRHDPSQVQY
LHPDLEPILKRTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNREVLENERQHFM
DGAMKKGYANALSSQIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYPTYFYANILS
NVIGNEAKTQLMIQEAKQQQIKIHGPHINWSQWRYVATQKGVYISLGAIKGIGYQSVQAI
VSERIEHGPFKDFFDFCDRIPNRIRTRRLLEAVILTGALDCFDKNRATLLQSIDKVTDSN
SDIDQSFVDTFATIKRDYLETEEMSEQQLSDYEKQYLGFYVSMHPVEKQFVKKQYLGIYQ
LNSKLINQPILVTMDAIRVIRTKKGQQMAFVELNDGEHTVDGVIFPKVFQSFAQLIQENA
YYIVWGKFEKRNEKMQMVIQKISPLEKYEEEKMKAVKRIVIREKVPEDIQNQLFSTQSKA
TVPVYFYNESSNQFQPIGHIEKNSEQLTQLLKAIEPQHIRLL
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggttgcccatttaaatattcatacttcatatgagcttttaaattcaagtataacaatt
aaaggggcaattgcgcgtgcgattgacataggctactcagctatagcgattacagattta
aacgtcatgtatggtgtgcctcaattttatgacgagtgtactaaaaaaggcattaaaccg
ttgctagggatgacgatttatataacagaccagctgaacgttttagaagtggtcctcatc
gctaaaaataacgaaggtttgaaaaatctttttcaattgtcaacagatattcaagtcaat
caacgggaacaagtatcaatttacgatattcaagcttatctacaacataatgttgttatt
tttaaaaatatgactgaacaaacgttgcattggttagacgaaatgcctatagaaagttca
tattatgtggatcaccattctgttgtagaccgttctatacctcaggtttatttggaaagt
gcgtattatttgaaagccgaagataaagaaacattaaaagtcttaaatgccattcgtgac
aacacaaaggtgaattttatagacaatgaagacggaccatcacgtcatatgtttactata
aatgaattgagtgaagctgaaatcgatgcacaatatgtgaaatctactgatgaggtcgca
gatttatgtgaagcaaaacttgagtatcatcaagcattgctcccagagtttcaaactcct
gatggtagttctgctgattattatttatggcgtgtattggaacagtcattacaaaataag
gatttatcaaaaccgaattatattgaacggttaaaatatgaatatcaagttatcactaaa
atgggttatgccgattattttctcatagtgagtgacttaatccgctatgccaaatcaaat
ggtgtcatggtagggccgggtcggggttcatcagcagggtctttggtcagttatttactc
aatattacgaccattgatcccttgaagtatgacttgctttttgagcgctttcttaaccct
gagcgtgtcacaatgccagatattgatatcgactttgaagatacacaaagagaaaaagtc
atccaatatgtacaaaacaaatatggtgattatcgtgtggcaggtattgtcacttttggt
catttacttgccaaagcagtggcaagagatgtggggcgagtgatgggatttgatgaagca
acgttgagcgaagcttctaagcttattcctagtaaattaggtgtgacccttgatgaagct
tatgcacaagagaattttaaagcatttgtgcatcgaaatcatagaaacgaacgttggttc
gaattttgtaaaaaacttgaaggtttacctcgaaacacatctacgcatgcagcgggtgtt
attgtcaatgatcagccattatacgaatccattccacttactgaaggtgacacagggctt
ttaacccaatggacaatgactgaggctgaaagaatcggtttattaaaaattgatttctta
ggattacgtaatctcacaatcattcatcaaatcatcaaacagattaaacatgatatgaaa
attgacttaaatattgaggaaattccttttgatgacaaggaagtatttcgtcttctctca
agaggcgatacgacaggtattttccaattagagtcagacggggtccgccgtgtgttgcaa
aaactacagccagagcattttgaggatatagtagctgtgacctctttataccgacctgga
ccgatggaagaaattccaacatatattcggcgacgtcatgacccttctcaagttcaatat
ttacatccagatttagagccgattctaaaaaggacttacggcgtgattatatatcaagaa
cagattatgcaaattgcgagtcaatttgcaggtttttcatatggtgaagctgatatttta
agacgtgcaatgagcaaaaagaatagagaagtattagaaaatgaacgccagcattttatg
gatggtgcgatgaagaaaggatatgccaatgcgttgagcagtcaaatttttgatttaata
ttgaaatttgctgattacggttttcctagagctcatgccgttagctattcaaaaatcgct
tatatcatgacttatttgaaagtacactatccaacttatttttatgccaacatattgagt
aatgtcattggaaacgaagcaaagacacaattaatgattcaagaagctaaacaacagcag
attaaaattcatggtccgcatattaactggagtcaatggcgctatgtagccacacaaaaa
ggtgtctatatctcattaggtgctataaaaggaattggatatcaaagtgtacaagctatt
gtttcagagcgcatcgagcatgggccttttaaagacttttttgatttttgtgatcgcatt
cctaatcggatacgtacgcgacgattactcgaagcagttattttaactggggctttagat
tgtttcgacaagaatagagcgacactattacagtcaatagataaagtgaccgattctaac
agtgatattgatcaaagttttgtagatacgtttgcgactatcaaacgagattacctagaa
acggaagaaatgtcagaacaacagttaagtgactatgaaaagcaatatcttggcttttat
gtgtcgatgcatccagtggagaaacaatttgtgaaaaagcaatatctcggaatttaccaa
ttaaatagcaaattaatcaatcaacctattttagtaacaatggatgcgattcgtgttatt
cgaacaaagaaagggcaacaaatggcctttgttgagttgaatgatggtgaacacaccgta
gatggtgtcatctttccaaaagtatttcaaagtttcgcgcaacttatacaagaaaatgct
tattacattgtttggggtaaatttgaaaaaagaaatgaaaagatgcaaatggtaattcaa
aagataagtccgcttgaaaaatatgaagaggaaaagatgaaagcagtgaagcgaatcgtg
attagagaaaaagtaccggaagatatacaaaatcaactattttcaacacaatcgaaagct
acagtgcccgtctacttttacaacgaatcatcgaatcaatttcaacctataggtcatatt
gaaaagaactctgagcaactgacccagttattaaaagcgattgaaccacaacatattcgt
ttgttataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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