KEGG   Sporothrix schenckii: SPSK_04889
Entry
SPSK_04889        CDS       T05555                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 13
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ssck  Sporothrix schenckii
Pathway
ssck03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPSK_04889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssck03009]
    SPSK_04889
Ribosome biogenesis [BR:ssck03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPSK_04889
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 Nup160 UTP15_C DUF2457
Other DBs
NCBI-GeneID: 27666926
NCBI-ProteinID: XP_016583372
UniProt: A0A0F2LXS1
Position
Unknown
AA seq 1027 aa
MATKLAYKTTFEVDQVIRPIYTGGSVALDSGSRILATTLGEDAVLTDLATGKLFARIEGD
GEPISTLILSPSASHLVVCSRSLAMRIYALQVSQDLDAVEPTLLRTLKPHATPAVVLAVD
RTSTLLATGAADGNIKVWDIRGGFVTHTFRGPSVLVSALHFFEVAATAGGAPAEVAARDG
KKKKNKKGTQQESLPASTAQAVDTAARFRLASGSQDGKVRVWDLHKRAVVANLDAHVSDV
QALDYSPAQNVFVTAGRDKTIIWWDAKTWTQRRVVPTFELIEAAGFVSGADGADAEADSG
AVTYSAGANGCIRLWETRTGREITAEQPARSDEELIVAALFRPAQSTLLCVQMDQTLALY
PVPTSRDLLNTFTSNAKAGGDSSGLAPLEPARRISGTHDDVIDLAFLLPDQSLLALGTNS
EDVRIVSVAEPEASSTPSSAAYFGQDVALLKGHTDIVVSLDVDWSGHWVATGAKDNTARL
WRVDQSATDAGGNKVYSCYAVFAGHAESVGAVALPKAVPEAGTPAFEDALNHPPAFLVTG
SQDLTVKRWDIPRQAPTASSAQQRALFTRKAHDKDINALDVDAAGQLFASSSQDRTVKIF
SVREGEVQGILRGHRRGVWSVKFAPLHTPSLTSDTGTVAGGSRGFVLTGSGDKTVKLWSL
ADYTCLRTFEGHTNSVLKVAWLGSGGDGAEDDGNDDDDGNDDDDGGEADDEYMDLDNDEE
RPSRRSASSSRGPAPVLFASAGGDGLVKVWDAASGEAACTLDNHEDRVWALAVRNPAPAP
TTSTTTTTTTTTTTTATSSKKRRPRMFVSGGGDATISFWRDTTASTVAAAAEAAKERVEQ
EQLLANHMRRGAYREALTLALQLNQPGRLLSVLSQVGEYGANPGVDAALASLTDDQLYLL
LLRVRDWNTNGRTATVAQRVLASIVRSYSATRLAGLARRRHSKAVEGGEPVVDDMSTGGV
SSSIRGANIKDVLDALLAYTERHYRRMAELLDESYLVDYTLQEMDALQMPGGPVAGEIED
VAMAGAE
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggcgacgaagctcgcgtacaagacgacctttgaggttgaccaggtcatccggccaatc
tacacaggtggttcagtggctctcgacagcggctcgcgcattctggcgacgacgctcggc
gaggatgctgtgctcacggacctggcgacaggcaagctgtttgcacgaattgaaggagat
ggcgaaccaatctcgacattaatattatcgccatccgcatcccacctcgtcgtctgctcg
cggtccctggccatgcgcatctatgccctacaggtgtcccaggacctggacgccgtcgag
ccaactcttctacgcacgctcaagccgcacgccacgccggccgtcgttctcgccgtggac
cgcacaagcacactcctggccacgggcgccgccgacggcaacatcaaggtgtgggatatc
cggggcggctttgtgacgcacacgttccgcgggcccagcgtgctcgtctcggcgctgcac
tttttcgaggtcgcagcaaccgccggcggtgctcctgctgaggtggccgcacgggacggc
aagaaaaagaagaacaagaagggcacccagcaggagagcttgcccgcgtctacagcacag
gctgtggacacggcagctcgcttccggcttgcgtcgggcagccaggacggcaaggtgcgc
gtgtgggacctgcacaagcgagctgttgtggccaatctggatgcgcacgtgtcagacgtg
caggcccttgactactcgccggcgcaaaacgtctttgtcacggccggtcgcgacaagacc
atcatctggtgggacgccaaaacgtggacgcagcggcgcgtggtgccgacgtttgagctg
attgaggcagctggctttgtgtctggtgccgacggtgccgatgcagaggctgacagcggc
gccgtgacctactctgctggtgccaacggctgtatccggctgtgggagacacgtacaggc
cgtgagatcacggccgagcagccagcacgatcggacgaggagctgattgttgcagcgctg
ttccggcccgcgcagtcgacacttctatgtgtgcagatggaccagactcttgctctctac
cctgtgccgacatcgcgggatctgctgaacacatttaccagcaatgccaaggctggtggt
gacagcagcggcctcgcacccctcgagccggcgcggcgcatctcgggcacacacgacgac
gtcatcgacctagccttcttgctgcccgaccagtcgctgctggcgctgggcaccaactcg
gaggacgtgcgcattgtctccgtggcggaaccggaagcttcatcgacacccagcagtgct
gcctattttggccaggatgtagccttgctgaaaggccacactgacattgtggtgtcgctt
gacgtcgactggtcgggccactgggttgccacgggtgccaaggacaacaccgcgcggctt
tggcgcgtcgatcaatcggcgacggacgccggcggcaacaaagtgtacagctgctatgcc
gtctttgcaggccatgcggagtctgtcggtgccgtcgcgctgcccaaggccgtgcccgaa
gcaggcacgcctgcgtttgaggatgccctcaaccacccgccggcattcctcgtcacgggc
tcgcaggatctgacggtcaagcgttgggacatcccacggcaggcaccaactgcatcgtcg
gcgcagcagcgcgccctgttcacccgcaaggcacacgacaaggacatcaatgcgctggac
gtggatgcggccgggcagctgtttgcgtcgtcgtcgcaggaccgcacggtcaagatcttt
tcggtgcgcgagggcgaggtgcagggcattctacggggccaccgccgcggtgtgtggtcg
gtcaagtttgcaccgctgcacaccccctcgctgacgagtgacacgggcaccgtggccggc
ggcagccgtggttttgtcctgacgggcagcggtgacaagacggtcaagctgtggagcctg
gcggactacacatgcctgcggacgtttgagggccacacgaacagcgttctcaaggtggcg
tggctgggcagcggcggcgacggcgccgaggacgacgggaacgacgacgacgacgggaac
gacgacgacgacggcggcgaagcggatgacgaatacatggatctcgacaacgacgaagaa
cggccgtcgcgccgcagcgcctcttcctcccgcggccctgctcccgtgctctttgccagt
gccggtggcgacggtcttgtgaaggtctgggatgccgcgtcgggcgaggcggcgtgcacc
ctcgacaaccacgaagaccgtgtgtgggcactggctgtgcgcaacccggccccggccccg
accacgtctacgactacgacaacgactacgactacgactacgaccgctacatcgtccaag
aagaggcgcccacgcatgtttgtgtccggtggcggcgacgccacgatctccttctggcgc
gacacgactgcgtcgacagtggctgccgcggccgaagccgccaaggagcgcgtcgagcag
gaacagctgctggccaaccacatgcgccgcggcgcgtaccgcgaggccctcacgctggcg
ctgcagctcaaccagccgggtcgtctgctgtccgtcttgtcgcaggttggcgagtatggc
gcgaacccaggcgtcgacgccgcgctggcctcgctgacggacgaccagctctacctgttg
ctgctgcgcgtgcgtgattggaacaccaacggacgcaccgcgacggtggcgcagcgcgtg
cttgcctcgattgtgcgcagctactcggcgacgcggctggccgggcttgcccggcgccgg
cactccaaggctgtcgagggcggtgagccggtggtggacgacatgagcactggcggcgtc
agcagcagcatccgcggcgccaacatcaaggacgtcctcgatgcgctgctggcctacacg
gagcgccactaccggcgcatggccgagctgctggacgagagctacctggtggactacacg
ctgcaggagatggatgctctgcaaatgccaggcgggcccgtcgccggcgagattgaagac
gtggctatggcgggcgcggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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