KEGG   Mammaliicoccus sciuri: CEP64_02770
Entry
CEP64_02770       CDS       T05176                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
sscu  Mammaliicoccus sciuri
Pathway
sscu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sscu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEP64_02770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscu03021]
    CEP64_02770
   03019 Messenger RNA biogenesis [BR:sscu03019]
    CEP64_02770
Transcription machinery [BR:sscu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CEP64_02770
Messenger RNA biogenesis [BR:sscu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CEP64_02770
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB Mor AAA_24 AAA AAA_25 Phage-MuB_C
Other DBs
NCBI-ProteinID: ASE33560
UniProt: A0A1X0TU13
Position
556988..558304
AA seq 438 aa
MAERVRTSPQYESFHELYKNYTTKELTSKAKELRITNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKKGDKVTGKVRKPKENEK
YYGLLQVDFVNDQNAEEVKKRPHFQALTPLYPQQRIQLETTSKNYSTRIMDLITPIGLGQ
RGMIVAPPKAGKTSLLKEIANAIAINQPKAKLFVLLIGERPEEVTDIERSVEQAEVVNST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSLTRLARAYNLVVPPSGRTLSGGLDP
ASLHRPKHFFGAARNIEAGGSLTILATALVETGSRMDDMIYEEFKGTGNMELHLDRKLSE
KRVFPAIDIRRSSTRKEELLLDKEELEMIWQLRNLFTDSNDFSERFIRKLKRTNSNEEFF
EVLRKSMVDSAKTGKPII
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggctgaaagagttagaacaagtcctcagtatgaatcgtttcacgaattatacaagaac
tatacaactaaagaattaacatcaaaggcaaaagaactgagaataacaaattatagtaaa
ttaaataaaaaagaacttgtcttagcaattatggaagctcaaatggaaaaagacggcaac
tattatatggaaggtatcttagatgatattcaacctgatggttatggctttttacgtacc
gttaactattctaaaggtgaaaaagatatttatatatctgctagccaaattagacgcttt
gagattaaaaaaggtgacaaagtaactggtaaagttagaaaacctaaagaaaacgaaaag
tattacggattgttacaagttgactttgtaaatgatcaaaatgcagaagaagttaaaaaa
agaccacactttcaagcgttaacccctctatacccacaacaacgtatccaattagaaact
acaagtaaaaattattcaactagaattatggatttaattacgccaataggtctaggacaa
cgtggaatgattgtagcgccacctaaagctggtaagacatcattacttaaagaaattgct
aatgctatcgcaattaaccaaccaaaagcgaaattatttgtattattaattggggaacgt
ccagaagaagtaacggatattgaacgttctgttgaacaagctgaagttgttaactcaaca
ttcgatgagccgccagaacatcatgttaaagtggctgaattattacttgaaagagctaaa
cgtcttgttgaaatcggtgaagacgtaattatattaatggattcattaacaagattagca
agagcatataacttagtcgtgccaccaagtggtagaacattatcaggtggtttagatcca
gcgtcccttcatagacctaaacatttcttcggagctgctagaaatattgaagcgggtggc
agtttaacaattttagcgactgcattagttgaaacaggttctcgtatggacgatatgatt
tatgaagaatttaaaggtacaggtaatatggaacttcatttagatcgtaaattgtctgag
aagagagtgttccctgcaattgatattagaagaagttcaacacgtaaagaagaattgcta
ttagataaagaagaacttgaaatgatttggcagttacgtaatttatttactgattcaaat
gatttctctgaaagatttattagaaagttaaaacgcacgaattctaacgaagaattcttt
gaagttttaagaaaatctatggtcgatagtgccaagactggtaaaccgattatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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