KEGG   Mammaliicoccus sciuri: CEP64_02965
Entry
CEP64_02965       CDS       T05176                                 
Name
(GenBank) ATP-dependent helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
sscu  Mammaliicoccus sciuri
Pathway
sscu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sscu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEP64_02965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sscu03019]
    CEP64_02965
   03009 Ribosome biogenesis [BR:sscu03009]
    CEP64_02965
Messenger RNA biogenesis [BR:sscu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CEP64_02965
Ribosome biogenesis [BR:sscu03009]
 Prokaryotic type
  rRNA helicases
   CEP64_02965
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 CMS1 Flavi_DEAD SUa-2TM
Other DBs
NCBI-ProteinID: ASE33597
UniProt: A0A9N7H5M0
Position
590447..591976
AA seq 509 aa
MQKFKELGISEATLNALDKMGFTEPTPIQIESIPHTLKGTDVLGQAQTGTGKTGAFGIPL
IDKVADKQGVQALILAPTRELANQVAEQLRSFSKGQNVSVVTVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRRTLKTESISTLILDEADEMMNMGFIDDMRFIMSKLPSENRQTLL
FSATMPKAIQELVQKFMKSPQIVKTMSNELSDPQIDEFYTIVKELEKFETFTNLLDVQNP
ELAIVFGRTKRRVDELTSALITKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKQGVAVTFVNPIEMDYIRQIEKANK
RQMSALRPPTPGEVMKAKESDVKAKVKGWVESPIEGRIEKIAESLIKEYGDQKLVAALLQ
ELITSNNDAEVQLTFEKPLSKKSNHRGKQGNRGGNSRGKSRTRFDGKNNKRRGNDKNNQF
DRNKGKNNKPNKQRSKKQFSGRTFAEHSK
NT seq 1530 nt   +upstreamnt  +downstreamnt
ttgcaaaaatttaaagaattaggtatttctgaagctaccttaaatgctttggacaaaatg
ggatttactgaaccaacaccaatacaaatcgaaagtattccacatacattaaaaggtacg
gacgtgctaggacaagcacaaactggaacaggaaaaactggtgcatttggtattccatta
attgataaagtagcagataaacaaggtgtacaagcattgattcttgcaccaacacgtgaa
ttagcaaaccaagtggcagaacaattacgtagtttcagcaaaggacaaaacgtaagtgtt
gtaactgtattcggtggcatgccaatagacagacaaatcaaatcacttaaaaaaggtccg
caaatcgtagtaggtacaccaggacgtgtgattgaccacttaaatagaagaacattaaaa
acagaatcaatttctacattgatcttagatgaagcagatgaaatgatgaacatgggcttt
atagatgatatgagatttataatgtctaaacttccatccgaaaatcgtcaaacattacta
ttctcagcaacaatgcctaaagctattcaagaattagttcaaaaatttatgaagagtcca
caaatcgttaaaacaatgtctaacgaattgtcagatccacaaattgatgaattctacaca
attgttaaagaattagaaaaattcgagacatttacgaatttattagacgttcaaaatcct
gaattagcgattgtattcggtcgtacgaaacgtcgtgttgacgaattaacaagtgcgtta
attactaaaggataccgtgctgaaggtttacacggagatattactcaagctaaacgatta
gaagtattgaaaaaattcaaaaatgatcaaatcgatattttagtagctacagatgttgca
gctcgtggtttagatatctctggcgtaagtcacgtttataactttgatatccctcaagat
actgaaagttatactcaccgtattggtcgtacaggtagagcgggtaaacaaggtgttgcc
gttacatttgtaaatccaattgaaatggattatatccgtcaaatagaaaaagctaataaa
cgtcaaatgagtgctttacgtccaccaacaccaggtgaagttatgaaagctaaagaatca
gatgttaaagctaaagttaaaggttgggtagaaagtccaatcgaaggtcgcattgaaaaa
attgctgaatcattaattaaagaatatggtgaccaaaaattagttgctgcattattacaa
gagttaattacttctaacaacgatgcagaagttcaactaacatttgaaaaaccattatct
aaaaaatctaatcatagaggcaaacaaggtaaccgtggtggtaactcacgtggtaaatct
agaactagatttgatggtaaaaacaacaaacgtcgcggaaatgataaaaacaatcaattt
gaccgtaacaaaggtaaaaacaataaaccaaacaaacaacgttcaaaaaaacaattctca
ggtagaacatttgctgagcattcaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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