KEGG T02777: SSDC

Candidatus Profftella armatura: SSDC_01425

Entry

SSDC_01425        CDS       T02777

Symbol

rlmB

Name

(GenBank) tRNA/rRNA methyltransferase

K03218

23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]

Organism

ssdc Candidatus Profftella armatura

Brite

KEGG Orthology (KO) [BR:ssdc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssdc03009]
    SSDC_01425 (rlmB)
Enzymes [BR:ssdc01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.185  23S rRNA (guanosine2251-2'-O)-methyltransferase
     SSDC_01425 (rlmB)
Ribosome biogenesis [BR:ssdc03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SSDC_01425 (rlmB)

SSDB

Motif

Pfam:

SpoU_methylase SpoU_sub_bind TBPIP_N

Other DBs

NCBI-ProteinID:

AGS06973

UniProt:

S5RQ12

Position

complement(352244..352990)

AA seq 248 aa
MSIKEKIIFGFHAINSKIIQNSSSIKTLYIDISRNDNRMKNIIKNAKLANIHIISINNKK
LFHIAKTHNHQGVVAKIKEFSFKKNLYELLDSIKEPLLLLILDEITDPHNLGACLRVADG
AGVHAIISTKNNSVGLNATVAKVSSGAIETIPFFTVTNLSNTLCKLKERNIYLIGASNKS
KKSLYNTNFLDSSAIIMGSEKKGLRHLTKKNCDILINIPMSGLIESLNVSVAAGIILFEA
RRQRIINI

NT seq 747 nt +upstreamnt +downstreamnt
atgtctataaaagaaaaaataatatttggttttcatgcaataaattcaaaaattattcaa
aactcatcttcaataaaaacattatatattgatatttcacgtaacgataatcgcatgaaa
aatataattaaaaatgcaaaattagccaatattcatataatttctataaataataaaaaa
ttgtttcatatagcaaaaacacataatcatcaaggagtagttgctaaaataaaagaattt
tcttttaaaaaaaatctttatgaattattagattctattaaagaaccattattattatta
atacttgatgaaattactgatccacataatttgggggcatgtttacgtgtcgcagatgga
gctggagtgcacgcaattatttctactaaaaataattcagtgggtttaaacgcaacagtt
gctaaagtttctagtggagctattgaaacaattccattttttactgtaactaatttatct
aataccttatgtaaattaaaggaacgtaatatttatttaattggcgctagtaataaatca
aaaaaaagtttatataatactaattttttagattcttcagctattattatgggatcagaa
aaaaaagggcttcgtcacttaacaaaaaaaaattgtgatattttgattaatattcccatg
tctggattaatagaaagtttaaatgtttcagttgctgctggtataattttattcgaagca
cgtcgtcaaagaataattaatatttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system