KEGG   Shewanella sediminis: Ssed_0027
Entry
Ssed_0027         CDS       T00596                                 
Name
(GenBank) Protoporphyrinogen oxidase
  KO
K00230  menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
Organism
sse  Shewanella sediminis
Pathway
sse00860  Porphyrin metabolism
sse01100  Metabolic pathways
sse01110  Biosynthesis of secondary metabolites
sse01240  Biosynthesis of cofactors
Module
sse_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:sse00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    Ssed_0027
Enzymes [BR:sse01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.3  protoporphyrinogen IX dehydrogenase (quinone)
     Ssed_0027
SSDB
Motif
Pfam: Flavodoxin_5 Flavodoxin_3
Other DBs
NCBI-ProteinID: ABV34640
UniProt: A8FP67
Position
33511..34038
AA seq 175 aa
MSNTLIIYSTVDGQTKSICELVQGINEGAGDSVTLASLDEAKLLNLADFDKILIGASIRY
GKHRPELYQYINHHHAVLSAKQNAFFTVNVVARKPEKNTPETNPYMKKFLELSLWKPQQL
AVFAGKIDYPSYRFFDKTMIRLIMWITKGPTDTSGTYEFTDWEQVEEFAKAFSEQ
NT seq 528 nt   +upstreamnt  +downstreamnt
atgagtaatacattaataatctattctactgtagatggtcagacgaaatcgatctgcgag
ctcgttcaggggataaatgaaggtgcaggtgatagcgtaactctggcttccctcgatgaa
gctaaattattaaatttagctgattttgacaaaattttgattggtgccagtattcgttat
ggaaagcacaggccagaactttaccaatacattaatcaccatcacgccgtactcagtgct
aaacagaatgcgtttttcaccgtaaatgtcgtcgccagaaaacctgaaaaaaacacgcct
gaaacgaatccctatatgaagaagtttttggagctgtcactctggaagcctcaacagtta
gccgtgttcgcaggaaagattgattatcccagttatcgcttctttgataagaccatgatc
cgtctcatcatgtggataaccaagggcccaactgacaccagcggtacttatgagtttact
gactgggaacaggttgaagagttcgctaaagcgtttagtgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system