KEGG   Shewanella sediminis: Ssed_0781
Entry
Ssed_0781         CDS       T00596                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sse03032]
    Ssed_0781
   03036 Chromosome and associated proteins [BR:sse03036]
    Ssed_0781
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sse02048]
    Ssed_0781
Enzymes [BR:sse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Ssed_0781
DNA replication proteins [BR:sse03032]
 Prokaryotic type
  DNA Topoisomerases
   Ssed_0781
Chromosome and associated proteins [BR:sse03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Ssed_0781
Prokaryotic defense system [BR:sse02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Ssed_0781
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C HSBP1
Other DBs
NCBI-ProteinID: ABV35392
UniProt: A8FRB9
Position
925813..928086
AA seq 757 aa
MSDAIDLSLDGVEQMPLRRFTEAAYLNYSMYVIMDRALPHIGDGLKPVQRRIIYAMSELG
LSAQSKHKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPK
SFAAMRYTEARLSKFSEVLLSELGQGTVDWGVNFDGTMKEPLVLPSRLPHILLNGITGIA
VGMATDVPPHNTRELVAACIELLDNPKADLAKIMEFVPGPDYPTEAEIITPSSDISKIYT
TGRGSIKARAVYKIENGEVVITALPHQASGGKILEQVAAQMQAKKLPMVVDLRDESDHEN
PVRIVVVPRSNRVDCDQLMAHLFATTDLEKSFRVNLNILGLNGRPQVKGLKQILTEWLEY
RFQTVTRRVQHRLDKILSRLHILEALMTAFLNIDEVIEIIRYEDNPKAELMSRFNLTDIQ
ADAILDLKLRHLAKLEEFKIKGEQSELEAERDKLQLLLSSDRRMKTLIKKELIQDGETYG
DDRRSPLVERGESKALTEQELAPVEAVTVVLSEKGWVRCAKGHDIDAKALSYKSGDGFLC
SAAGRSNQPSVFIGSTGRAFATETHTLPSARSQGEPITTRFNLSPGEVMEHVLLGDDDKF
YLLASDAGYGFVGSYKDMVSRNKAGKALLSLPANAKVIVPQIVDKSKVESILAITNEGRM
LLFSLEALPQLSKGKGNKIIGIPSERAKSREELLSHLHVVPEDTAVTLWAGKRKLTLKPS
DLEHYRGERGRRGAKLPRGLQRVDSVEIGDGSLNTPE
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgagtgatgcgatagatttaagtcttgatggtgtagaacagatgcctcttcggcgcttc
acggaagccgcctatctgaactattccatgtacgtcattatggaccgtgctttgcctcac
atcggtgatgggttgaagcctgtacaacgtcgtattatttacgcgatgagcgagcttggt
ttatcggctcaatctaagcataagaagtcagcacgtacggtcggtgatgtattaggtaaa
taccatccacatggcgatagcgcttgttatgaggctatggtattgatggcccagccattt
tcctacaggtatccattggttgacggtcagggcaactggggagccccggatgaccctaaa
tcttttgccgctatgcgttacaccgaagctcgtttgtcaaaattctcagaggttctttta
agtgagttggggcaggggaccgtcgattggggcgtgaattttgatggaacgatgaaggag
ccattggttctgccatctcgtttaccgcatattctactcaatggtataaccggtattgcc
gtggggatggccacggatgtaccaccccataatacacgtgagttagttgccgcctgtatt
gagctgctcgataatccgaaagcggatttagccaaaataatggaattcgttcctgggccg
gattatcccactgaagccgagatcattactcccagcagtgatatcagtaaaatttatact
acgggccgaggctcgattaaagcgcgagccgtctataagattgaaaatggcgaagtggtc
ataacggcgcttcctcatcaggccagtggcggtaagatcctggagcaggtagcggctcaa
atgcaggctaaaaaattgcctatggttgtcgatctcagagatgaatccgaccatgagaat
ccggttcgaatcgtagtggttcccagatctaatcgagtcgattgcgaccagctaatggct
catctgtttgctactacggatttagaaaaatctttccgtgtaaacctgaatattttaggt
ctgaacgggcgtccacaggtgaagggcttaaagcagatcctgaccgagtggttggaatat
cgtttccagacggtgacccgtcgtgttcaacatagactcgacaaaatcttatcgagattg
catatccttgaggccttgatgacggccttcctgaatatcgatgaggtgattgagattatc
cgttatgaggataatccgaaagccgaattgatgtcgcggtttaatctaaccgatattcag
gctgatgccattctcgatcttaagttacgccacctggctaaactcgaagagtttaagatc
aagggcgagcagagtgagcttgaagccgagcgtgacaagctacaactgctgttgagctca
gacaggcgaatgaagacgcttattaagaaagagttgatacaagatggcgaaacttatggc
gatgacagacgctcccctctggttgaacgtggagagtctaaggcattaacagagcaggaa
ttagcaccagttgaagccgtgactgtcgtgttgtcagagaaaggttgggttcgctgcgct
aaaggtcatgatatcgatgcgaaggcattatcttataagtccggggatgggttcctctgc
tcggctgcgggtcgcagtaaccaacctagtgtgtttattggttcaacggggcgtgctttt
gcgaccgagactcacaccctaccctcggcaaggagtcagggcgagccgataacgacgcgc
tttaatctgtcaccgggtgaggtgatggaacatgtattattaggcgatgatgataaattc
tatctactcgcttcagatgcaggctatggctttgttggttcctataaggatatggtatcc
cgtaacaaagcgggtaaagctttattgagtctgcctgccaatgctaaggtcatcgtacct
cagatagtcgataagtcgaaggtggagtcgatactggcgatcaccaatgaaggtcgcatg
ttgttattctctcttgaagccctacctcagttgtcaaagggtaagggtaataaaatcatc
ggtattcctagcgaaagagcgaagagccgggaagagctgttatcgcatttgcatgtggtt
cctgaagatactgcggtaacactctgggctggtaagcgtaaattaacgctaaaaccaagc
gatctggaacattatcgaggtgaacgtggtcgacgtggggctaagttacctcgtggctta
cagcgcgtcgatagtgttgagattggtgatggttcgctgaacactcctgaataa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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