KEGG   Shewanella sediminis: Ssed_0981
Entry
Ssed_0981         CDS       T00596                                 
Name
(GenBank) two component transcriptional regulator, winged helix family
  KO
K02483  two-component system, OmpR family, response regulator
Organism
sse  Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sse02022]
    Ssed_0981
Two-component system [BR:sse02022]
 OmpR family
  Unclassified
   Ssed_0981
SSDB
Motif
Pfam: Response_reg Trans_reg_C Rhomboid_N LisH_2
Other DBs
NCBI-ProteinID: ABV35592
UniProt: A8FRW9
Position
complement(1164352..1165065)
AA seq 237 aa
MTEPQSTHRVLLVEDDIRLANLIVDYLKSHGMHVEVERRGDTVLTRLISYKPDIILLDIM
LPGMDGLTLCEKLPDYFAGPILLMSALGSNEDQIKGLELGADDYVVKPVDPALLIARINN
LLRRNAKPPKVESHCLSFGKLSIDPHTQAIRLGDIEVDLTSHEFELLWLLASQAGQVLSR
QYIYQYLLNIDFDGKDRKIDVRVSRLRKKLGDNIETPFRIKTVWGQGYLFAPEAWSN
NT seq 714 nt   +upstreamnt  +downstreamnt
atgacagagcctcaatcgacccatagagttttactggtagaagacgacattcgtctcgcg
aacctgattgtcgattatttaaagtcgcatggaatgcacgtagaagttgagcgccgggga
gatacggttctaactcggttaatcagctacaagcctgatattattctattggatatcatg
ttacccggaatggatggtctgacactgtgtgaaaagttacctgactactttgccggcccc
attctactcatgagtgcgcttggctcaaatgaggatcagatcaaaggactggagttaggt
gccgatgactacgttgttaaacctgtcgatcctgctcttctgatcgccagaattaacaat
ctgttacgccgcaacgctaagccgcctaaggttgaatctcactgcctgagctttggtaaa
ttaagtatcgatccacacacacaggcaatcaggctcggtgatattgaagtcgatctgacc
agccatgagtttgagctgctctggttattggcttcacaggcaggacaagtattgagccgc
caatatatctaccaatacctgctcaatattgattttgacggtaaggatagaaaaatagat
gtcagagtctcccgtctgagaaagaaattgggcgataatatcgagacgccatttaggatc
aagacagtttggggacaaggatatctatttgcccctgaagcttggagcaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system