KEGG   Shewanella sediminis: Ssed_1150
Entry
Ssed_1150         CDS       T00596                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
sse  Shewanella sediminis
Pathway
sse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Ssed_1150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sse03400]
    Ssed_1150
DNA repair and recombination proteins [BR:sse03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Ssed_1150
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Ssed_1150
SSDB
Motif
Pfam: RecO_N RecO_C
Other DBs
NCBI-ProteinID: ABV35761
UniProt: A8FSD8
Position
1370385..1371065
AA seq 226 aa
MLRGYVLHTRPFRDSSVLVNMLVDGQGRVDCVARLGSGKSSIKSILQPFQPLIFELSGRS
SLKNLSQVEAASPAIPLSGEVSFSGFYLNELLVRCTSVDHGGEALFFTYHRTLMAMAAGF
CQSQLRYFELELLKEIGLMPTLTVDISQDAIEADYYYRLLPDEGFVSALGPKTTHYSGEM
LLALNEHKLLPAHFKQAKHLMRLMLGPCLGDKPLKSRALFKYRPTS
NT seq 681 nt   +upstreamnt  +downstreamnt
atgttacgcggttatgtgctgcacactcgtccctttcgtgactcgagtgtattagtgaat
atgttggtcgatggtcaggggagagtcgattgcgtcgctcgtttagggagtggcaagagc
tcaatcaagagtattttacaaccttttcagccccttatttttgaactttctggccgctcc
agccttaagaacctctcccaagttgaagctgcgagtccggctattcctttaagtggcgag
gtgagcttctcgggattctatctcaatgagttactcgtacgctgcaccagtgtcgatcat
ggtggtgaggcactcttctttacctaccacagaaccttaatggcgatggctgccggtttc
tgccagagtcagttgaggtactttgagttagaattgctcaaagagataggcttgatgccg
acgctcaccgtcgacatcagtcaagacgccatcgaagccgattactattatcgtttgttg
cctgatgaaggttttgtcagtgctctgggccctaagaccacccactatagcggagagatg
ttgctggcactgaatgagcataagttgctgcctgcacattttaaacaggccaaacacctg
atgcgcctgatgttaggcccctgtttgggtgataaacctttgaagtcgagggcgctattt
aaatatcgaccaacatcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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