KEGG   Shewanella sediminis: Ssed_2597
Entry
Ssed_2597         CDS       T00596                                 
Name
(GenBank) Phenylalanine--tRNA ligase
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
sse  Shewanella sediminis
Pathway
sse00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sse00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Ssed_2597
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sse01007]
    Ssed_2597
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sse03016]
    Ssed_2597
Enzymes [BR:sse01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     Ssed_2597
Amino acid related enzymes [BR:sse01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   Ssed_2597
Transfer RNA biogenesis [BR:sse03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    Ssed_2597
 Prokaryotic type
    Ssed_2597
SSDB
Motif
Pfam: B3_4 tRNA_synthFbeta FDX-ACB B5 tRNA_bind
Other DBs
NCBI-ProteinID: ABV37204
UniProt: A8FWI1
Position
complement(3146468..3148855)
AA seq 795 aa
MKFSESWLREWVNPSISREELSHQITMAGLEVDGIEGVAGEFSGVIVGEVVECGQHPDAD
KLRVTKINVGEDELIDIVCGAPNCRLGIKVAVAMVGAVLPGDFKIKKAKLRGEPSFGMLC
SYGELGIDVESDGILELPVDAPIGADLRDYLSLNDAVIDVDLTANRADCLGMAGLAREVG
VLNRQSVTEPTWEAVSPTIDDAIKIDLQAPAFCARYLGRVVKNVNVKAESPLWMQEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLAQLAGDIQVRMGSGDEKLTLLDGKEITVPAD
TLVISDQERPLALAGVFGGEYSGVNTDTQDIMLECAFFAPLAILGKARRLGLHTDSSHRF
ERGVDPELQHKVMDRATRLVLDICGGEAGPVVEAKSEEHLPKPVEIVLRRSKLDRILGHH
ISDAEVTEILERLGFDVTVNSDTWEVTTATYRFDMAIEEDLIEEVARIYGYNNIPNTAPV
ASLSMPDHKESDISLKRVRSMLVARGFQEAVTYSFVDPKLQNLVHPGEEAMILPNPISVE
MSAMRLSMFTGLLGAVGYNQSRQQNRVRLFETGLRFVPDTTAESSVRQQAMLGAVISGNQ
KDEHWSMESKTVDFFDLKGDLEAIIGLTVSDVEFTFRSATHPALHPGQCAEILRNDRVIG
IIGAVHPSLEKPFGLNGKTIVFELELDALLHAGLPLAQTVSKFPANRRDIAVVVDDNVSA
GDVVKMIRKVGQNQLVGLNLFDVYQGKGVEPGKKSLAIALTLQDNTRTLEEKEIAEMVDS
VVSALKSEFNALLRD
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgaaatttagtgaatcttggcttcgtgagtgggtaaacccaagcattagtcgtgaagag
ttatcccatcaaatcaccatggctggtttggaagtggatggtattgaaggtgttgccggt
gagttcagcggtgttatcgtgggtgaagttgtcgaatgtggtcaacacccggatgccgat
aagctacgagtaacaaagatcaatgtcggtgaagatgagttgatcgacatcgtttgtggc
gcacctaactgtcgtctgggtattaaagttgcagtggctatggtcggtgcagtactaccc
ggtgactttaagattaagaaagccaaactacgcggtgagccgtcgtttggtatgctttgc
tcatacggtgagctaggcatagacgttgaaagcgatggtattctcgagctaccagtcgat
gcgccaattggtgcagaccttcgtgattacttgagtcttaatgacgccgttatcgatgtt
gacttgacagctaaccgtgcagactgtctcggtatggcaggccttgcccgtgaagtgggt
gtattaaaccgtcagtctgtgactgagccaacttgggaagcggttagcccaacgattgat
gacgctatcaagatcgatcttcaggcgccggcattttgtgcacgttatttaggtcgtgtg
gttaaaaacgtcaacgtgaaagccgaatcgccactttggatgcaagagaagttgcgtcgc
agtggtatccgctcaatcgatcctattgtcgatattactaactacgtgttgatcgaattc
ggtcagcctatgcacgcgttcgatcttgctcaactggcaggtgacatacaagtacgcatg
ggaagtggtgatgagaagctaacactgcttgatggtaaagagatcactgttcctgctgac
actctagtcattagcgatcaagaaaggcctctggcgcttgctggtgtctttggtggcgaa
tactcaggtgtgaacaccgatactcaggacatcatgctcgagtgtgcgttcttcgcacct
ctagccatcttaggtaaggctcgtcgtcttggcctgcacacagactcttcacatcgcttc
gagcgtggtgttgaccctgagctgcagcataaggtgatggatcgcgctacacgtctggta
ctcgatatctgtggcggcgaagcgggtcctgttgtcgaggctaaatcagaagagcatctt
cctaagcctgttgagatcgttttgcgtcgtagcaagcttgaccgaatcctgggtcaccat
atctctgatgccgaagtgactgagatccttgagcgtcttggctttgatgtaacagtgaat
agcgatacctgggaagtgacgacggcaacgtatcgtttcgatatggctatcgaagaagac
ttgattgaagaagttgcccgtatctacggttacaacaatatccctaacacagcgcctgta
gcatccttaagcatgcctgatcataaagaatcagatatcagcttaaagcgtgttcgcagc
atgcttgttgcccgtggtttccaggaagcggtgacttatagtttcgtcgatcctaagttg
caaaacttagttcatccgggtgaagaggcgatgatattgccgaacccaatctctgttgag
atgtcagcgatgagactatcgatgtttaccggtcttttaggcgccgtgggttataaccag
agccgtcaacaaaatcgtgttcgtcttttcgagaccggcttacgctttgtacctgatact
actgcagaatcaagtgtacgtcagcaagcgatgttgggtgcggttatctcaggtaaccaa
aaagatgaacattggtcgatggagtctaaaacggtcgatttcttcgatcttaagggcgac
ctcgaagccatcatcggcttgacagtttccgatgttgaatttacttttagaagtgcaaca
catccagctcttcatccggggcaatgtgctgaaatattaaggaatgatcgagtcattggt
atcattggtgcggtacatccaagcttagaaaagccttttggactcaatggtaaaacaatt
gtttttgagctcgaattggacgctttattacatgccggcttaccgctagcccagactgta
tctaagtttcctgctaaccgtcgtgacatcgccgtcgtagtagatgacaatgtttctgcc
ggagatgttgtaaaaatgataagaaaagttggccaaaatcagttggttggcttaaactta
ttcgatgtataccaaggtaaaggtgttgagccaggtaaaaagagcctagccatcgcactt
acattacaagacaacacacgtacacttgaagaaaaagagatagctgagatggtagattca
gtggtttccgctctcaagtcagagttcaacgcactgttgagggattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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