KEGG   Shewanella sediminis: Ssed_4358
Entry
Ssed_4358         CDS       T00596                                 
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
sse  Shewanella sediminis
Pathway
sse03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sse00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Ssed_4358
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sse02044]
    Ssed_4358
Secretion system [BR:sse02044]
 Type II secretion system
  General secretion pathway protein
   Ssed_4358
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 SH3_14
Other DBs
NCBI-ProteinID: ABV38960
UniProt: A8G1I7
Position
complement(5333954..5336128)
AA seq 724 aa
MNNKKFRHKLIAGMVMGASLLAPQIAWSEQYAANFKGTDIQEFINIVGKNLNRTIIVDPT
VRGKINVRSYDLLDDEQYYQFFLNVLQVYGYAVVEMDNNIIKVIKDKDAKTASIRVADDD
RPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVVNYDPSNVLMISGRAAVVNKL
VEIVRRVDKQGDTEVQVVSLEFASAGEIVRIIDTLYRSTANKSQLPGQAPKVVADERMNA
VLVSGDEKSRQRVVSLIKKLDAEQASMGNTKVRYLRYANAEDLVEVLTGFAQKLVDDKDG
GAQQGGSKRRNEINIMAHADTNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVG
EGDDVGFGVQWATAAGGGTQFNNLGPTIGEIGAGVWQAQEKEASQTCTGSGDNKTCTDNP
ATQGDITLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTKSNVLATPSITTLDNQEASFI
VGDEVPILTGSTSSSSNTNPFQTVERKEVGVKLKVVPQINEGTSVKLTIEQEVSGINGKT
GVDVTFATRRLTTTVMADSGQIVVLGGLIKEEVQESVQKVPFLGDLPIIGHLFKSSSSGT
RKTNLMVFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQDRGINLMPDSEVPILEEWNQS
DYLPPEVNEILERYKEGKGLATKMRETDPALKTISESKEKDQQESEESSSENNTSATTED
KDDE
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgaataataagaaatttcgccacaagcttatcgccggcatggtgatgggggcctcactt
ttagctcctcaaatcgcttggtctgagcagtatgcggcaaattttaaagggacagatatt
caagagtttatcaacatcgttggtaaaaacctgaatagaaccatcatcgtagacccaacg
gttcgtggcaaaataaatgtccgaagctatgacctgcttgacgatgagcagtattatcaa
ttcttcctcaatgtgctccaggtttatggctatgcggtcgtagagatggacaacaacatc
atcaaggtgatcaaggataaggatgccaagacggcatcgatcagggttgccgatgatgat
agacccggtttaggcgatgagatggtgacacgtattgttgccctctataacacagaagcc
aaacagttggctccactgctacgccaactcaatgacaatgccggtggcggtaatgtcgtt
aactatgacccatcgaatgtgttgatgatctccggccgtgcagccgtggtaaacaaatta
gttgagatcgttcgccgcgtcgataagcagggcgatacagaggttcaggtggtctccctt
gagtttgcatcggcgggtgaaatcgttcgaattatcgataccctctatcgctcgactgcc
aataagtctcagttgccgggtcaggcaccaaaagtggtggccgatgagcgcatgaatgct
gttttagtcagtggtgatgagaagagccgtcagcgtgtggtgtcactgattaagaagctg
gatgccgagcaagccagtatgggtaacactaaggttcgttacctgcgttatgccaatgcg
gaagatctggtcgaggtgttgaccgggtttgcccagaagttggtcgatgataaagatggt
ggcgcgcagcaaggtggcagtaaacgtcgtaatgaaattaacattatggcccatgccgac
accaacgccttggtcatcagcgccgagccggatcagatgcgcaccatcgagagtgttatc
aatcagctcgatattcgccgtgctcaggtattggtggaggcgattatcgttgaggtcggc
gaaggggatgatgttggcttcggcgtacagtgggccacagctgccggcggtggtactcag
tttaataatttaggccctacaattggtgaaattggcgccggtgtctggcaggctcaggaa
aaagaggcttctcaaacctgtaccggatcgggtgataacaagacctgtaccgataacccc
gcgactcaaggtgatatcaccttgttggctcaagccttaggcaaggttaacggtatggca
tggggtgttgccatgggcgacttcggggcacttattcaggccgtttccagcgatacgaaa
tcgaatgtgctcgcgactccctctatcaccacactggataaccaggaagcgtcgtttatc
gtcggtgatgaggtaccaattttgaccggctcgacttcgagttcgagtaataccaaccca
ttccaaacggtggaacgtaaagaggtcggggttaagcttaaagttgtgcctcagatcaac
gaaggtacctcggttaagttaaccatcgagcaggaagtctctggcattaacggtaaaacc
ggtgtcgatgtaaccttcgcgacccgtcgtctgacaaccactgtaatggccgattcgggt
cagattgtggtcttggggggcttgatcaaagaagaggtgcaggagagtgtacagaaagtc
cccttcctcggcgatcttcctattatcggtcatctgttcaagtcttcatcaagcggtacg
agaaaaactaatttgatggtgtttatcaagccaaccattattcgtgacggcattaccatg
gaaggcatcgcagggcgtaagtacaactacttccgagctctgcagcttgagcagcaggat
cgcggtattaacttaatgccagacagcgaagtgcctatactcgaagagtggaaccaatcc
gattaccttccacccgaagttaacgagatccttgagcgttataaagagggcaaaggtcta
gctactaagatgcgtgaaacggatccggccttgaagacgatatctgagagtaaagaaaaa
gatcaacaagagagcgaagaaagctcaagcgaaaataacacttcagccaccaccgaagat
aaagatgatgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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