KEGG   Streptomyces alfalfae: A7J05_04485
Entry
A7J05_04485       CDS       T05110                                 

Definition
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ssia  Streptomyces alfalfae
Pathway
ssia03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A7J05_04485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssia03400]
    A7J05_04485
DNA repair and recombination proteins [BR:ssia03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A7J05_04485
SSDB
Motif
Pfam: Ku Rho_N
Other DBs
NCBI-ProteinID: APY85090
UniProt: A0A1P8TBT5
Position
complement(1208411..1209406)
AA seq 331 aa
MARSIWSGVLTFGLVTVPVGLFTATEDHTIHFHQLQRGTGDRIRYKRINERTGEEVPTDD
IVKGYDLGQGDYVVVEPEELDDIAPGKSKVIDMTGFVDLDRIEPVYFDRTYYVAPRGKEY
VKVYELLRAALERSNKAGIATFTMRSKQYLTALRAQDDVLVMHTMRWADEVRDPREDLDV
MPARRPEVADRELRTAQQLIDALSIDWDPNDYHDTYEERVKELVAAKREGKEVVGEEGPP
DATNVVDLMSALERSVERNRGGGKSKGKDGRRKAPAKTRKRPDEDLSSLTKSELYRRATD
ADVPGRSKMSREQLVEALTGRKARKGRKAAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgagatcgatctggagcggggtgctgaccttcgggctggtcacggtccccgtgggc
ctcttcaccgcgaccgaggaccacaccatccacttccaccagctccagcggggcaccggc
gaccgcatccgctacaagcggatcaacgagcgcaccggcgaggaagtgcccaccgacgac
atcgtgaagggctacgacctcggccagggcgactacgtcgtcgtcgaacccgaggaactc
gacgacatcgccccgggcaagtcgaaggtcatcgacatgacgggcttcgtcgacctcgac
cggatcgagcccgtgtacttcgaccggacctactacgtcgcgccgcgcggcaaggagtac
gtcaaggtctacgagctgctgcgggcggccctcgaacggtcgaacaaggcgggcatcgcc
accttcacgatgcgcagcaagcagtacctcaccgccctgcgcgcccaggacgacgtcctg
gtgatgcacacgatgcgctgggcggacgaggtgcgcgacccgcgcgaggacctggacgtg
atgccggcccggcgccccgaggtcgccgaccgtgagctgaggacggcccagcagttgatc
gacgccctcagcatcgactgggacccgaacgactaccacgacacgtacgaggagcgcgtc
aaggaactcgtcgcggccaaacgcgagggcaaggaggtggtcggcgaggaagggccgccc
gacgccacgaacgtcgtcgacctgatgtcggcgctggagcggagcgtcgagcgcaaccgg
ggcggaggcaagagcaagggcaaggacggccgccgcaaggccccggcgaaaacgaggaaa
cggccggacgaggacctgtcctcgctcaccaagagcgagctgtaccggcgcgcgaccgac
gccgacgtcccgggccgctcgaagatgagccgggagcaactggtcgaagccctcacgggg
cgcaaggcgcgcaaggggcggaaggccgcggcctga

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