KEGG   Sclerotinia sclerotiorum: SS1G_02269
Entry
SS1G_02269        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SS1G_02269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_02269
Enzymes [BR:ssl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     SS1G_02269
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SS1G_02269
  mRNA degradation factors
   3'-5' decay
    Pan complex
     SS1G_02269
SSDB
Motif
Pfam: UCH_1 PAN2_N RNase_T UCH Herpes_UL95
Other DBs
NCBI-GeneID: 5492559
NCBI-ProteinID: XP_001596053
UniProt: A7EAD7
Position
Unknown
AA seq 916 aa
MDGDWEELPPSGVHPDLTQAPARAFDSSQELFWTGDELGRVRSWYGAEGIRYTSYKAGQD
PIRQFLFHDKGVITVPTSEHFKIMKRSRYICAATAHGSVSILDSYNFTVIKTWQAHTALI
NDMDAQSEYLLTCGYSLPQQGSYRLDTFVMVLDLKTLTTLPPIPFPPGAAFVRMHPRMLT
TTYIVSQQGQIHIVDLINPNSSNVRQANVLSTLRSLEIASSGDAIALSDMENSVHIWGSP
ARFRFSEFSNPIEVADSDEKPVRTDWSDDTPLNTVGMPYYRENLLSAWPSHMIFEVGAPP
VKLDSNWISNPKVADWYIYGRNARKDVRRNQIENTRTIEKAQASIPAPKFLSEKAREAVN
DATPERGMNDIADSIGNRELPTLQAGTNALYMNVEIKYSKFGVDDFDFGFYNKTPYSGLE
THISNSYANALLQVMRFTTLIRNLALKHTATSCVNDMCLLCEMGFLFDMLEKAAGTVCQA
TNLLKTFSHHPEAKHLGLLEEDSRGIPLSNMLQSMNRFFLDRIPNEFKSVPGGSNMLERV
FSTPATMIIKCVFCKSEHTRPGATSSVDLTYPQTPAALLILRQIHHQKANGFSSMIFYTR
VIDKTHRPLSSNHETPTEGTLMAIDTEFVSIRQPEIEVNSEGERQTIRPIAHALARVSVV
RGFGEDEGFPFIDDYINCKDPIVDYLTSYSGISPGDLDPRQSRHNLVSLKTAYKKLWILL
NLGCKFVGHGLKTDFRVINIQIPKSHVIDTADLFFIPAKQRKLGLAFLAWYLFREDIQVE
THDSIEDAKTALRLWRKWEEWTTAEKLGGALVEDLLMEVYKQGQACNFRPPGFNARKERE
REREREREGKDISRANTPPGNEDGGVSLKGPSTPIRKPLGALPFGSGGSGSANGSGLSSF
GGGGSGWTPGKGSPLR
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggatggtgattgggaggaactgccaccttcgggtgtgcatccggatcttacacaagct
cccgcgcgagcattcgattcttctcaagaattgttttggacgggggacgaactgggacgc
gtcaggagctggtatggtgccgagggaataagatatacatcctacaaggctggccaagat
ccaattcgtcaattcctgttccatgataagggggttattactgtacccacgagcgagcac
ttcaagatcatgaagagaagccggtatatttgtgcagccacagcgcatggatccgtcagc
atactagattcttataacttcactgtgatcaagacttggcaagctcacacggccctcatc
aacgatatggatgcgcaaagtgagtatctacttacttgtggctattcattaccacagcaa
gggtcatacagacttgatacttttgtcatggttcttgacctcaagacattgaccacccta
cctccaattccctttcctcccggagcagcttttgttagaatgcacccgcgaatgctgaca
accacatatatcgtttcgcaacaaggtcaaattcatatagttgacttgatcaatccgaat
tcaagtaatgtgaggcaagcaaatgttttgtccacattgagatctttagagatcgcttct
tcaggggacgctattgccttgtcggatatggaaaatagcgtacacatatggggctcacca
gccagatttcggttttccgagttcagtaatcctatcgaggttgcagattcggacgagaaa
cctgttcgtacagactggtccgatgatactccattaaatacagttggtatgccctattat
cgagaaaaccttttatctgcttggccgagtcatatgattttcgaagttggtgcaccgcct
gtaaagctcgactcaaattggatttcaaatccaaaagttgcagactggtatatatacggt
cgcaacgcaaggaaggatgtcagaaggaaccagatagagaatacgagaacgatcgaaaaa
gcccaagcgagcataccagcgcccaaatttttgagtgaaaaggctagagaagccgtgaat
gatgcgacgcccgaacgtggtatgaacgatatcgcagatagcatagggaatagagagctc
cctactttgcaagccggtactaatgctttgtatatgaatgtcgagattaagtatagtaaa
tttggagttgatgattttgattttggattttataataagactccatactcggggctcgag
actcatatctccaattcatatgcgaatgcgttgttgcaagtgatgagattcactaccctc
atcaggaatttggccttgaaacacacggctacaagttgtgttaatgatatgtgtttgtta
tgtgagatgggattcttgtttgatatgcttgagaaagcagcggggaccgtgtgtcaagca
acaaacttgctgaagactttcagccatcatccagaagctaagcacttgggcttattggag
gaagattcacgtggaattccactatcaaatatgcttcagtcaatgaatcgttttttcctc
gatagaattccaaatgaatttaaaagcgtccctggtggttcaaatatgcttgagcgtgtt
ttttctacgcctgccacaatgatcataaaatgtgttttttgcaagagtgagcacacacga
ccaggagcaacctcgtctgttgatcttacctatccgcaaacaccagctgctttgctcatt
ctgcgccaaattcaccatcagaaagccaatggtttctcttcaatgattttctatactcgt
gttattgataaaacccataggcctctctcctctaatcatgaaacaccaactgaaggaact
ctcatggctattgacactgagttcgtctctattcgtcaacccgaaatcgaagtaaactcc
gaaggtgaacgacaaactattcgacccatcgcacacgctctggcccgtgtctctgttgtc
cgaggctttggtgaagacgaagggtttccatttattgatgattatatcaattgcaaagat
cccattgtcgactacctgacatcttattcaggtattagtccgggtgatcttgatccacgt
caatcaagacataatcttgtttctcttaaaactgcttacaagaaactctggattttacta
aaccttggatgtaaatttgtgggacatgggctcaagacagattttagagtcatcaatata
cagatacccaaatcgcatgtcattgatacagctgatctttttttcatcccagctaaacag
agaaaattgggactggcgtttctggcatggtatcttttcagagaagatattcaagttgaa
acacatgatagtattgaagatgcgaaaacagcgttgaggctgtggaggaagtgggaagaa
tggactacagcagagaaacttggaggagcactggtagaagatttattgatggaagtctat
aagcaagggcaggcgtgcaattttagaccgccggggtttaatgctaggaaggaaagggag
agggaaagagaaagggaaagagaggggaaggatattagtagggctaatacaccgcctggg
aatgaagatggtggtgtaagtttaaagggaccgagtactcctattcgtaaaccattggga
gcactaccgtttgggtcaggaggtagtggaagtgcgaatggtagtggactttcgagcttt
ggtggagggggaagtggttggactcctgggaagggaagtccgttacgatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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