KEGG   Sclerotinia sclerotiorum: SS1G_03976
Entry
SS1G_03976        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SS1G_03976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_03976
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SS1G_03976
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 5491222
NCBI-ProteinID: XP_001595886
UniProt: A7EF85 A0A1D9QBV6
Position
Unknown
AA seq 657 aa
MPPAVRIRPYKDFLTPALHRRFALATAVLAAVCYIEAVWVGEWNSFLWSWFPLGRAGIRS
GLFFICAFMIFILRVAQLHVGMRTSVSTFHTFIQYAPKFQTVQTALWYLFSAWFFSEIYI
WSVPESAGLNRIKLAAKTSRPILNEKPIYLTMFLLFNAIVQAGFHLMYDYDRIDIPLTKT
GPEVSSEQSSHTTVLPTVQLKAKAMPLAISCLKRVAIMAVVSPFIYSMNITLPVPVILPI
YTFNIRESVWGFTRSFAKIFWNLPKAATPPNELPFHWTMVLRTIISGLMLTLLWEFGNLA
FSVYVAQAPLKHDRPITYESRDPNGSLLTGLKGKKLQTRAFAFWELVEIAQRYQGRRKAI
FEDIDRVGGSAWSQILATCLETINEINQRIEEYDPKKQPPVISLYEEQETQDPVSSLPRL
LTEPLKKEPKSGLVTKPQPAESRSRRYLEAVGSFAKSQGELSPPDKISRSRQLKDDKKKA
AIKSAVSTQFQQPEGIQKILREQAIVILRLPFGKPFRQEYRKEIASVVLGTPYGDLGIII
DAIDSITRFAVCSLVEDKYGKVQKDIREIVEIYTKTIVEVQKFRTGLGAHWTDVEGRQES
PEVDLLLAVLKSGLREIVRAFGDYSAELKINQAALRAAREAMNMPPPRQEDMEQRRR
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgccgcctgcagtacggattcgtccttacaaggactttttgactccagccttgcataga
agatttgcattggcaacggctgtattggcagcagtatgctacatcgaagcggtatgggtc
ggggaatggaattcattcctttggtcatggtttcctctgggtagggctggcatcagaagc
ggtcttttcttcatatgcgcattcatgatattcatccttcgagtagctcaattacatgtc
ggaatgcggacctcagtctcgaccttccacacatttatacaatacgcgcccaaatttcag
accgttcagacagctctttggtatctcttttcggcatggtttttcagcgagatatacata
tggtcagttcctgagagtgcaggtctcaatcgcatcaagcttgcagcaaaaaccagtcga
ccaatattgaacgagaaacctatttatttaactatgtttcttttatttaatgctattgta
caagctggattccaccttatgtacgactatgatcgcatcgatattccacttacgaagacc
ggaccagaggtttcatccgagcaatcttcacatacaactgtactgccaacggttcaattg
aaagctaaggcaatgcctctagctataagctgtctcaagcgcgttgctatcatggctgtg
gtatctccctttatctattctatgaatattacccttcctgtccctgtcatcttaccgatt
tacacgttcaatatcagagagagtgtatggggatttacccgttcatttgcaaagattttc
tggaacctaccaaaagccgctactcccccgaatgagttgcctttccactggaccatggtg
cttaggacgattatttccgggctcatgcttaccttactgtgggaatttggaaatcttgcg
ttctcggtttatgtggcgcaggcgcctttgaagcatgacagaccaattacctacgaatct
cgagacccaaatgggagtttgttgactggattaaagggtaagaagttgcaaacaagagct
ttcgcattttgggaacttgtagaaattgcacagcggtaccagggaagacggaaagccatt
ttcgaagacattgaccgtgtgggcggttcagcttggtctcaaatccttgcaacatgcctc
gagacaattaatgagataaatcagcgtatcgaagaatatgatccaaaaaaacaaccaccg
gtgatcagtttgtatgaggagcaggagacgcaggacccagtatcatcacttccccgtctc
ttgactgaacccctaaagaaagaaccaaagagtggtcttgtgacaaaacctcaaccagcg
gaatcaagaagtaggcgttatctggaagcggttggctcatttgcaaagagtcagggggaa
ctatcaccacctgataagatatcccgtagccgccagttgaaggacgacaagaaaaaggca
gcaattaagtccgcagtatctacacaatttcaacagccggagggaatccagaaaatccta
cgtgagcaggcgattgtgattctcaggctaccattcggaaaaccgttcaggcaggaatat
cgaaaagagattgcaagcgtagtgttaggaaccccctatggcgatctaggtatcatcatt
gatgctatcgactcaataactaggtttgctgtgtgcagtcttgttgaagacaaatacgga
aaggtacagaaggacatcagggaaatcgttgagatatataccaagacgattgtggaagtg
cagaagtttaggaccggattgggcgcacattggacagatgtagaaggaagacaagagagc
cccgaggtagatttgttactcgctgtgttgaaaagcggacttagagaaatagttcgggcc
tttggggattatagtgcagagttgaaaataaaccaagctgccttgagggcagcgagagaa
gccatgaatatgcctcctccaagacaggaggatatggagcagaggcgtcgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system