KEGG   Sclerotinia sclerotiorum: SS1G_05377
Entry
SS1G_05377        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03420  Nucleotide excision repair
ssl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SS1G_05377
  09124 Replication and repair
   03420 Nucleotide excision repair
    SS1G_05377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssl04121]
    SS1G_05377
   03400 DNA repair and recombination proteins [BR:ssl03400]
    SS1G_05377
Ubiquitin system [BR:ssl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SS1G_05377
DNA repair and recombination proteins [BR:ssl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      SS1G_05377
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 5489828
NCBI-ProteinID: XP_001593949
UniProt: A0A1D9QAR4 A7EJ84
Position
Unknown
AA seq 460 aa
MNQLIYDRSTGNLGPNAFARIQTSRLIHAISPASKLQFNGGEESPTVATDAEAREYEAVK
LWAHQTGVNALSIDRFEGKILLSGGADASIKIWDLDQIPTGASEYTFRPTGIVPRNASAH
KYGITHLSFYTFDSAAFLSSSYDHHLKLYSTESLQVSADFDLNSIVYSHAVSPIAQHLLV
ACATQHPAVRLVDLRSGASTHSLAGHHRAILSVAWHPNIDHILASGCVDGTVRLWDIRKS
SGAVGLLDLEDAIGVTITHGMAGGRSRVSAKAHSGAVNGLTWTDNGNYIISAAHDERIRV
WDAATGGNTLASFGPTIKNGHLSSLPLVVSPTALTPPMKELLFFPNEKEILVFELHEGRL
LKRLKVPGPTVAAVRSRTGERNIRNRITALAWREPVDGIYSAHSDGLIRAWIPRTEEDVE
LDREEEEEGETRHENEGGKRKRNVLDDVFRDLTRQKISFG
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaatcaattgatctatgatcgatcaacgggcaaccttggcccaaatgcctttgcgcgc
atccaaaccagtcgattaattcatgcgatttcaccagcttcgaagctacaattcaatggt
ggcgaagaatctccaactgtagccacagatgcagaagctcgagaatatgaggcagtgaag
ttatgggcgcaccaaactggagtgaacgcactatcgatagatagattcgaaggaaagatt
cttctttctgggggagcagatgcatcgatcaaaatttgggatcttgatcaaatccccacc
ggggcttcagaatatacattccgaccaaccggaatagtccctagaaatgcttccgcgcac
aagtatggcattacacatcttagtttctatactttcgattctgccgcttttctctcttca
tcatacgatcatcatctcaaactatactccacagagtctctccaggtctctgcagacttc
gatttaaactctatcgtctattcgcatgccgtatctcccattgcacaacatcttttggtg
gcttgcgcgactcaacacccagctgtcagactcgttgatcttcggtcaggcgcaagtaca
cattcattagccgggcatcatagggctatactttctgtcgcttggcatccgaatattgat
catatattagctagtgggtgtgtcgatggtaccgttcgtctttgggatatacgtaagagt
tccggagcagtgggcttgctggacttggaagatgcaattggggttacgattacacatggc
atggcaggtggtcgatcaagagtttcagctaaagcacattcaggcgctgttaatggtcta
acctggacggataatggaaattatatcatatctgcagcgcatgatgaaagaattcgtgtc
tgggatgcagctacgggtggaaatacccttgcaagcttcgggccaacaataaagaatgga
catctttcaagtctacctctagtagtatcacctacggcattaacgcctcccatgaaagaa
ctcctattcttccccaatgaaaaagaaattctcgttttcgaactccacgaaggccgcctt
ctcaaacggttgaaagttcctggtcccactgtagcagcagtgcgatctcgaactggtgaa
agaaatatcagaaatcgtattacagcattggcttggagagaaccagtcgatggtatatac
tccgctcattctgatggactgattagagcttggatacctagaactgaagaagatgtagag
ttagatcgtgaggaagaggaggaaggtgaaactcggcatgagaatgaagggggcaagagg
aagaggaatgttctggatgatgtttttagagatttgacgagacagaaaataagttttggt
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system