KEGG   Sclerotinia sclerotiorum: SS1G_11243
Entry
SS1G_11243        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_11243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssl03041]
    SS1G_11243
Enzymes [BR:ssl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     SS1G_11243
Spliceosome [BR:ssl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    SS1G_11243
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    SS1G_11243
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_N DEAD HA2_C AAA_22 AAA_19 AAA_30 T2SSE Flavi_DEAD ResIII nSTAND3 SRP54
Other DBs
NCBI-GeneID: 5484052
NCBI-ProteinID: XP_001588001
UniProt: A0A1D9QGE5 A7F0X4
Position
Unknown
AA seq 996 aa
MASKKYALLPMEEEEIGPAKVVAKKKEKRSHRESSSRRDRHRERSPRRERSPRKDTEQPS
KNIRNKANDDYEDRWGDEEYVSEEEPEFQEPASKRVKTSHSDDDISDSEKERRRDQAEKD
AFAQRLLSKNSDKSKKILEDRSDPLMAQRRALADDAAARSAAMPDIRERSRQEYLKKRET
ERLALLRRQVEDETRELNDPYSNLSQKEKAEFAKNREILRLADERLRIDDHLDGYAMPDD
YITEKGKLNQKKKQDALYKRYVEKDEYGQEKFVTEHEEWERQQEKLARNQIQSTERVDQG
EYDYILDEEQGIKWIMDSKLPGQGLDKEARFLGEQLKAAEQKAKTIEDTRKNLPIYAYKD
EFLAALDQFQTIILVGETGSGKTTQLPQYLHEAGYTKDGMKIGVTQPRRVAAMSVAQRVS
EEMGCKLGNEVGYAIRFEDCTSDKTLIKYMTDGHLLKEVMITPSLDEYQVIMIDEAHERT
VHTDILLALLKDLAKERPEIKLLIASATINAQAFSDFFDSAPIFNVKGRSYPVEIYNTPQ
PEANYLAAAITTLFQIHTSQPSGDVLIFLTGQDEIEAAEERISDISRKLGSRVPELVICP
IYANLPTDLQTKIFEPTPKGARKVVLATNIAETSLTIDGIVYVIDPGFVKENIYNPATGM
SKLVTVACSRASANQRSGRAGRVGPGKCFRLYTKWAFMNEMEESTTPEIQRTNLNGTVLL
LKSLGINDLLTFDFMDPPPTETLIGALNQLYALSALNNRGELTKIGRQMAEFPTDPQVAK
SIIASDQLACSDEVLSIMAMLGESSALFFRPKGEQRVHADSARARFTVKEGGDHLTYLNI
WNQWVDNDFSTVWAKENFLQQRSLTRARDVRDQLAKLCERVEVTIASCGASNIEPIQKAI
TAGFFANAARLQRDGDSYRTVKRNTTVYIHPSSVLMANDPPVKLVVYHELVQTTKEYMRS
CIPIKANWLHELAPHYHKKKEIEEMGEKKLSNRSRI
NT seq 2991 nt   +upstreamnt  +downstreamnt
atggcttccaaaaaatacgcgcttcttccaatggaagaagaggaaataggtcctgcgaaa
gttgtagcaaagaagaaggagaaaaggtcacatcgcgagagctcctcgcggcgtgacaga
caccgagaaaggtcccctcgtcgcgagagatctcctcgtaaagatacagagcagccttcg
aagaatatccgaaataaggcaaatgatgattatgaggatcgatggggcgatgaagaatat
gtttctgaagaagaaccagaattccaagagcctgcttccaaacgagtcaaaacaagccac
tcagacgatgacatttcggattcagaaaaagaacgaaggagagatcaagcagagaaagat
gcttttgcgcagaggctgctttcgaagaattccgacaagtcgaagaaaatcctcgaggat
agatccgaccctctcatggcacagcggagagctttggcagacgatgctgctgcaaggagt
gcagcaatgccagatataagggaaaggtcgaggcaagagtacctgaagaaacgtgagacg
gagcggctcgctctgctgaggagacaggtcgaggatgagacgagggagctgaacgaccct
tattctaatttgtcgcaaaaggagaaggcagagttcgctaagaacagagagattcttcga
cttgccgatgagagactgagaattgatgatcacttagatggctatgctatgccggacgat
tatatcacggagaaagggaaactcaatcagaagaagaaacaagatgcattatacaaacgc
tacgtcgagaaagatgaatatggccaggagaaatttgttaccgagcatgaggaatgggaa
aggcaacaggaaaagctagccagaaaccaaattcaaagtaccgaacgagtcgaccaaggc
gagtatgattacattttagacgaggaacaaggaattaagtggattatggattcaaagcta
cccggacagggtctggataaggaagcaaggttcctaggtgagcaattgaaagctgctgag
cagaaggcaaagaccatcgaggacacgaggaagaacctcccaatttacgcttataaggac
gaatttctagctgctctagaccagttccagactattatacttgtcggtgagacaggatct
ggaaaaacaacacaattgccgcaatatcttcatgaagcagggtatactaaggatggcatg
aagattggagtgacccaaccaagaagagtggctgccatgtctgttgcgcagcgtgtatcc
gaggagatgggatgcaagcttggaaatgaagttggttacgccattcgtttcgaagattgc
acgagcgacaagactcttatcaagtacatgaccgatggacatcttttgaaagaggtcatg
ataacaccttctctggatgaataccaggtaattatgattgatgaagctcacgagcggact
gtgcataccgacatactcctagctctactcaaagatcttgccaaagagaggccagaaatc
aaacttttgatcgcctcggcgacgatcaacgcacaagcattttcggatttcttcgacagc
gctcctattttcaatgtcaaagggcgtagttacccagttgagatttataacaccccacag
ccagaagcaaattaccttgctgctgctattaccaccttatttcagatacatacctctcag
ccgagtggcgatgtgctgatatttttaacgggtcaggacgagattgaggcggctgaagaa
cgaataagtgatatttcaagaaaattgggctctagagtacctgagctcgttatttgtcct
atttacgcaaatcttccaactgatctacaaaccaaaatcttcgaaccaacgcccaaaggt
gcacgaaaagtcgtcttggcaaccaatattgcagagactagtttaaccattgatggaatt
gtatatgttatcgacccaggattcgtaaaggagaacatttacaatccggcgacaggaatg
tcgaagttagttacagtagcatgttcacgggcatctgcaaatcagagaagtggtcgtgct
ggtcgtgtaggacctggaaagtgcttccgtttgtacacaaaatgggcgttcatgaacgaa
atggaagaaagtaccactcctgaaattcagcgaacgaatttgaatggcacagtattgcta
cttaagtcacttgggatcaatgatcttttgacctttgacttcatggaccctccacccaca
gagaccttaattggtgctcttaatcagctatatgctttgtctgctttgaacaaccgtgga
gagcttaccaaaattggtaggcaaatggctgaattcccaactgatcctcaggttgcgaag
tctatcattgcttcggaccaactggcctgctccgacgaagtgttgagcataatggcaatg
ttaggtgaaagctcggcactattcttccggccgaaaggggaacagagagtgcacgcggat
agtgcgcgagcccgctttacagtaaaggaaggaggtgatcacctcacctacctcaatatc
tggaatcagtgggtggataatgatttcagcactgtctgggcgaaggaaaatttccttcaa
cagcgatctctcaccagagcgagagatgttcgagaccagcttgcaaagctttgtgaacgt
gtggaggttacaattgccagctgcggagcatcaaatatcgagccaatccaaaaagcgatt
acggcagggttctttgccaatgcggcacgattacaacgagacggtgacagttatcgcaca
gtcaagagaaacaccaccgtgtacatacatccttcatcagtattgatggcaaatgatccc
cctgttaaactggtggtgtatcatgaactggtgcaaactacaaaggagtatatgcgcagt
tgcattcctatcaaggcaaattggctgcatgagctcgcaccacattatcacaagaagaaa
gagatagaggagatgggggagaagaagttgtcaaatcgaagtaggatataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

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