KEGG   Sclerotinia sclerotiorum: SS1G_12348
Entry
SS1G_12348        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K14311  nuclear pore complex protein Nup188
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SS1G_12348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssl03019]
    SS1G_12348
Messenger RNA biogenesis [BR:ssl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SS1G_12348
SSDB
Motif
Pfam: Nup188_C Nup188_N-subdom_III Nup188_SH3-like
Other DBs
NCBI-GeneID: 5483162
NCBI-ProteinID: XP_001587318
UniProt: A7F350 A0A1D9Q3J7
Position
Unknown
AA seq 1836 aa
MVPVAEASYFPDLGKCLKGEEILISWETAFFALLNIQESGARSTLEKFFKESRVLSLLAN
PVDVFPEPTTKTKSEFQSKLSPINADHSSAEYDVKKVSEDALWLSGTAKIDEVSALRIVV
QEHQSRAYAQLLGKLSEEELISLQDAFGNKRSTNLLSAGSLIGTSAEVAPTEEESQGNRR
VRDWYEGLHTEVLGRWKSLGASPHRMVELVQTIDAGLTKLFNERGSEWSLEGDGRDDLEL
EWASNQIVEATHMMETIFYYIFSSDTALEISHSDLVLEWFTFVSKFKFLDEVGMLHPTLQ
AVAVPLQTITAIISAAILNVDSCLIFLEKPSKDLAPADLAEGPNKPWLLNQAVIVKLHQI
LTDAASTSYMTAGPAVLAWSVILKHIKVRVAVRERLQRRRHEGLCDDDEDIDEPLPIGTE
PILAPDAYEEVLKQIKITDELVDYLALSAVNESRVFEVLANISRTLGDNYEAPFLPQLGS
SLRIAILELMKASAPDIGYNGPTLQTILSVVDGGQQYWDFVDLRNAESEFEPITYFVTDV
GLVREFWQNASMRYPWEASPFQNLVHSLAYLHVVDGGTHESIFSLLDSRSTFTYPLPYQF
VDYETIQEEDNNNSVQLTSDLPMFEPRGRGNNKRLLIGNGNQGQALALAAANGDLRIPAG
TAGVMIVENDPKVVYLTYAYRGMRYFGKLLETYLVAGEEYDAITGMETDAETVADIIGTF
ATGLLALSRSGKEAHEIQNDATEFFQTASSALNRNRDITLVISAIFEQELQRQSSESSTD
ASLDILISCVQYLHALLLFSPGRVWPLIGRSGLLFNDRGDGGKLSNIVGRIEVISGRYTF
LVSCTRLFEALVNDFAVNAIARNRKTTTASARFSQVQEHNVRVADKVLSEVLLYFTRYLT
EVLESSYTWQFDLPGEQLQLTCTIMSSFDKMLTYAFGIQGDPEEQPQSDSRPKSEIGRDP
KEHVVSPVPIMGALRPAAMHIVDSFLSKSSGPMKFGPILRTLFYGFNTRPTTLYANRTRL
VTEGVKSALQFSRKLLRISALLEKPSHLETQLFTAAPLIARLYAVNDSYRTPVIKLFEAM
IVSASSSTSEPPSLLGYLGAKTSKNFLNVVSDLDTPLIRDENVGSIWHFLSMIMSSRQQW
FANYVLTGKTPRDALKKKKPEATVSSLPKPLLLTALDNLSQIGDIPDSEALMMLEFVSLA
QNFWPWTMYELGNSTGFITYLSNYIKTLKPIQVSSRSEPAIKACYRTRIAAYIAEILAMH
LFHSRQTGKPSIAKDLMPNLDYYYENAGGLPTYNASLHGNLKQNFDSKYARSSLQSFKKT
DLEDRKFGENYFYDLQILDQMLHSDVAWTGRRNDGYKFELASANINLSLVDAQVALLNAW
KILAVELSSNITKESGQQETLVDAALKCLASNAQSPQAEKLYSRLLRTRADFALVACQRL
IEVNPRSSKMKGLLKIIWETIRSLDKNFELAIATGDGPYYRLLLKILFLALRVHAEDNNQ
GGIELRASTRKQKVESESPADIYMVVDIVERVVAGGLLDLAHIIHENHEESSPEDIALVT
GILQASLRIPGIEFHHAQIVTLMANCNTPRLATTLFSWSDQIAINGDPIYGELSILFLLE
LSSMATMAEQLAVDGVLGQVSSASITTYLRRGNVSPFADGAGIQRCYNIWVRGILPLILN
LLHSVGASIATEVALFMNQFPHLLAQSAAAFDAPESSRTTSISQPRHMCLSMASEVHSIA
LIVYILNGFREQLLGIQVVPGVNWDLGAVAENVEFWLGSRAVLRERIVPMGDKELEWRGK
KIQSGKAGALGCLDRLEEKVVIEMMGVRDVITGGDP
NT seq 5511 nt   +upstreamnt  +downstreamnt
atggtcccagtcgcagaggctagctattttcctgatctgggtaaatgtttgaaaggagaa
gaaatattgatctcttgggagacggccttctttgctctcttgaacattcaagaaagcgga
gcccgatctacacttgagaaattcttcaaagagtccagagtattatctttacttgccaat
cctgtcgatgtctttccggagcccaccactaagaccaaatccgaattccaatccaagctt
agtccgatcaacgccgaccattcctccgcagagtatgacgttaagaaggtatccgaagat
gcactatggttgagtgggacagctaaaatcgacgaggtttccgctctacgaatagtcgtt
caagaacatcagtcgcgggcatatgcgcaacttttgggaaaactctccgaggaagaattg
atcagtctccaggatgcctttggcaacaaaagatctacaaatttactctccgctggatca
cttattggcacaagtgcggaggttgcgccaacagaagaggaaagccaggggaaccgacgc
gtgcgcgattggtacgagggtctgcatacagaagttttaggcaggtggaagagcttgggt
gcctccccgcatcgtatggtggaactggttcaaactatcgatgcgggacttacaaaactg
ttcaacgagaggggtagtgaatggtccttggagggtgacggacgtgatgacctcgagctt
gaatgggcaagcaatcagattgttgaggcaacgcacatgatggagacaatattctattat
atattttcctctgatactgcgcttgaaatttcccactcagatcttgtacttgaatggttt
acctttgttagcaagttcaaatttctggacgaggtgggcatgcttcatccaactcttcag
gccgtggctgtgcccttgcagactatcaccgccattataagcgccgccatacttaacgtc
gatagctgtttgatattcctggagaaaccttctaaagatttagctcccgctgatttggct
gagggtccaaataaaccatggttgttgaaccaagctgtaatcgttaaactacatcaaata
ctcacagatgcagcctccacaagttatatgaccgctggcccggcagtcctcgcatggagc
gttattctaaaacacatcaaagtccgtgtcgctgttcgagagagactccagcgtcgacga
catgagggcctctgtgatgacgatgaagatattgatgaaccattgccaattggaacagaa
cctatccttgccccagatgcttatgaagaggtgctgaaacaaattaaaatcacggatgag
ctcgttgattatctagctttaagcgctgtcaacgagagtcgcgtgttcgaagttcttgca
aacatttcaagaacgcttggcgataactacgaggcacctttcctgccacaacttggttca
agcttgagaatcgcgatactggagctcatgaaggcaagtgcgcccgatattggttacaat
ggcccaacactgcaaaccattctttctgttgtagatggtggacagcagtactgggatttc
gttgatctacgaaatgctgaaagcgagtttgagcctatcacctatttcgtcacagacgtt
ggcttggttcgtgagttctggcaaaatgctagtatgcgttatccttgggaagcttctccc
tttcaaaacctcgttcactctctggcatatttgcacgttgttgacggaggtactcatgag
tcaatattctcattgctagactctcgatcgaccttcacatacccattaccatatcagttc
gtagattatgaaacgatccaggaggaagataacaacaattctgttcagctgactagcgat
cttccgatgtttgagccccgagggcgcgggaacaataaaaggcttctgataggaaatgga
aaccaaggacaggcactggcgttggcagcagccaatggggacctacgtattccagcggga
acagctggtgttatgatagttgaaaacgatccgaaagtggtttacctaacctacgcttat
cgtggtatgaggtattttgggaagttgttagaaacatatttggtagcgggggaagaatat
gacgctattaccggtatggaaacggacgctgagactgtagctgacattattggaacattt
gcgacggggctcctcgccttatccaggtcgggaaaagaggcgcatgaaatccaaaatgat
gctacggaattcttccagactgctagttcggcgttgaatcggaacagagatattacactt
gtaatatctgctatcttcgagcaagagttgcagaggcaatcgagcgaatctagcactgat
gcatcgctcgacattttgatcagttgcgtacaatatttgcatgcgttgctccttttttcg
cctggaagagtctggcctcttattggacgtagtggtcttctattcaacgatcgtggtgat
ggtggtaaactttccaatatcgtcggaagaattgaagttatatcggggagatacacattc
ctcgtatcatgcactcgactctttgaggcgctggtcaatgacttcgcagtaaatgctatc
gcgaggaaccgcaagacaaccacggcctcagctcgatttagccaggtccaggaacacaat
gttcgagttgccgataaagtcctctccgaggttctcctctactttactcgatacctgacg
gaggtactggaaagttcatacacatggcagtttgatttaccaggcgaacaactccagctc
acatgtaccataatgtcttcctttgataaaatgcttacctatgcctttgggatccaaggt
gatccagaagaacaaccacagtcggactctcgtccaaagtcagagatcggcagggatccc
aaagagcatgtggtttcccctgttccaattatgggggcgttaaggccagctgccatgcac
atcgttgatagctttttgtccaagtcctctggccctatgaagtttggaccaattcttcgg
accttgttctatggcttcaatactcgtcccactacgctgtatgcaaatcgaacacggcta
gtgactgagggtgtaaaatcagcacttcaattttccagaaaacttcttcggattagtgca
ttattagaaaaaccatcacacttggagacacagctattcaccgctgcacctctcatcgcg
agactttatgctgtaaatgatagctatcgcacacccgtcataaagttgtttgaagcgatg
atagtcagcgcttcgagtagcacctcggagcctccttcacttctaggttaccttggtgcg
aagacttcgaagaatttccttaacgtcgtgtcggacctggatacccctttaattagagat
gaaaatgttggatcaatatggcatttcctgtcaatgataatgagcagtcggcagcaatgg
tttgcaaattatgttctcacaggtaagacaccaagagatgcgttaaagaagaagaaacca
gaggctaccgtatcttcattaccgaaacccctacttctcacggctcttgacaatctctca
caaatcggagatattccggattcggaggctttgatgatgttagaattcgtctctttggca
caaaacttttggccttggaccatgtacgagctgggaaatagcacaggcttcattacttat
ctctctaactacataaagaccttaaaaccgattcaagtttcgtctagaagcgagccagca
atcaaggcttgttatcgtactcgaattgcggcatacattgcagaaattcttgctatgcac
ctctttcattctagacaaactggcaaaccttcaattgccaaagatcttatgccaaaccta
gactattactacgaaaatgcgggaggccttccgacctacaatgcatctctccatggcaat
ctcaagcaaaatttcgattccaagtatgctagatctagtcttcagagtttcaagaaaacg
gatctggaggaccgcaaatttggggagaactacttttacgatctacaaatacttgaccaa
atgctccattccgacgtagcttggacagggcgcagaaatgacgggtataagttcgaactc
gcgagtgctaacatcaacttatcattggttgatgctcaggtggctcttttaaacgcctgg
aagattcttgctgttgagctaagtagcaacataaccaaggaatctggccaacaagagacc
cttgttgatgctgctctcaagtgccttgcctcaaatgcgcagagcccacaagcagaaaaa
ttatattctcgattactccgaacacgggcagactttgcccttgttgcctgtcaacgattg
atagaagtaaacccaagaagctctaaaatgaagggcctactaaagataatctgggagaca
atccggagtttagataaaaactttgagcttgcaattgcaactggggatggaccgtattat
agactactcctcaaaatcttattcctggctctgcgagtccatgccgaagataataatcag
gggggtattgaactcagagcatcgacacgaaaacaaaaagtggaatcggaatcaccagca
gacatttatatggtcgtcgatattgtagagcgtgtagttgccgggggcttgcttgacctg
gctcatatcattcacgaaaaccatgaagagtcatccccagaagacatcgcgctcgttacg
ggcattctgcaagccagtcttcggatacctggcatcgaatttcaccacgcacaaatcgtg
actctcatggcaaattgcaacactcctcgtttagctactacactattttcttggtctgac
caaatcgcaataaatggcgatcctatctatggtgagctgagcatcctcttcctcttagaa
ctctcaagtatggccaccatggccgaacagctagccgttgatggcgtccttggccaggtc
agctccgcaagcataaccacttatctccgtcgcggcaatgtttctccgttcgctgatggt
gctggtatccaacgctgttacaacatttgggtccgcggtattcttcctttaattctgaat
cttcttcattcagtcggcgcatccatcgctacagaagttgcgctcttcatgaaccaattt
ccccatctccttgctcaatctgcagccgctttcgacgcacctgagtcctcacggacgacc
tcgatatcacaaccaagacacatgtgtttatcaatggcctcagaagttcactcgatagct
cttattgtctatattctcaatgggtttagagaacagctgctaggaatccaagttgtcccg
ggggtaaattgggatcttggcgcagtagcggagaatgtagaattttggctgggcagtcga
gcagtattaagagagaggattgtccccatgggtgataaggaattggagtggagagggaag
aagatacaatctggaaaggcaggagccttgggctgcttggatcggctagaggagaaagtg
gttattgaaatgatgggggttagagatgtgattactgggggcgatccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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