KEGG   Sediminispirochaeta smaragdinae: Spirs_0899
Entry
Spirs_0899        CDS       T01287                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ssm  Sediminispirochaeta smaragdinae
Pathway
ssm01501  beta-Lactam resistance
ssm01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Spirs_0899
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Spirs_0899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssm03036]
    Spirs_0899
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ssm02000]
    Spirs_0899
   01504 Antimicrobial resistance genes [BR:ssm01504]
    Spirs_0899
Chromosome and associated proteins [BR:ssm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Spirs_0899
Transporters [BR:ssm02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Spirs_0899
Antimicrobial resistance genes [BR:ssm01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Spirs_0899
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 GCV_H CusB_dom_1 Biotin_lipoyl DUF4083
Other DBs
NCBI-ProteinID: ADK80033
UniProt: E1RCF3
Position
948247..949248
AA seq 333 aa
METKKGDRIIQIILLLIIAAGFAGIALILKGSGADSGQKGGMPGGPGAGGAPTAQQQSSD
GSGESSTVAVEAEYAARQTVSQFIRVNGDVVSDVSVDIYPDVAGKIVVRNVDPGNFVKKG
DVVAIVDPSVPGEFYSRSPILSTISGTIIDVNVNVGDTVSTSTSVAVVGDLTKLSLVTYV
PERYITYLKLGLHAEVFLEAFPDTVFDARVVQLNPVVDNESRSMEVKLEIVNQDSRIRAG
MFASMKLITRESRDCIAVPSGAVSSYYDDSVVYVVKDDNSVERRVVSLGLKSDEMVEVLS
GLSENELVVTQGVSSVTDGSPVRMVNDPDAVEE
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggagacgaaaaaaggcgatcggataattcagatcatacttttgttgataatagctgca
ggttttgcaggtatcgcattaatacttaaaggctctggtgccgattcaggacaaaaaggc
ggcatgccgggaggtcctggggcaggtggcgcgcctactgcacagcagcaatcttcggat
ggatcgggagaatcttccacggtcgccgttgaggccgaatatgccgcaagacagaccgta
agtcaatttattcgtgtaaatggtgatgtcgtaagcgatgtttcggtcgatatctatccg
gatgtggccggaaagatcgtagtgcgaaacgttgatcccggcaatttcgtgaaaaagggc
gatgtggtcgccattgttgacccgtcggtacccggcgagttttacagccgaagcccgatt
ttgtcgacgatttcagggacgatcatcgatgtgaatgtgaatgtgggagataccgtttcc
acctccacttcggtggccgtcgtcggtgatcttacgaaactttctcttgtaacctatgtg
cccgaacgatacattacctatctcaaattggggctccacgcagaggtctttctcgaagcc
tttcctgacacggttttcgatgccagggttgttcagcttaatcccgtcgtagataacgaa
tctcgctccatggaagtcaaactcgagatagtcaatcaggattcccgtattcgagccgga
atgtttgcttcgatgaaacttatcaccagggaaagccgtgattgtatcgcggtcccgtcc
ggtgctgtttcaagctattacgacgattctgttgtatatgtcgtcaaggacgacaatagt
gtggagcgtcgggtggtaagcttgggactgaaatcggatgaaatggtcgaggttctttca
ggcctttccgaaaacgagcttgtggttacccagggggtctcttccgtaaccgatggttct
cctgtgcggatggtcaacgacccggatgccgtggaggaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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