KEGG   Shigella sonnei Ss046: SSON_0681
Entry
SSON_0681         CDS       T00274                                 
Symbol
farR
Name
(GenBank) transcriptional regulator of succinylCoA synthetase operon
  KO
K11922  GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
Organism
ssn  Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssn03000]
    SSON_0681 (farR)
Transcription factors [BR:ssn03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    SSON_0681 (farR)
SSDB
Motif
Pfam: UTRA GntR HTH_DeoR HTH_11 HTH_Crp_2 DUF6070 Rrf2 HTH_41 HTH_20 HTH_CodY
Other DBs
NCBI-ProteinID: AAZ87438
ShiBASE_China: SSO0681
UniProt: Q3Z474
Position
complement(725661..726383)
AA seq 240 aa
MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILE
SIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEILIFEVIPADDFLQQQLQITAQ
DRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEI
IPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgggacacaagcccttataccggcagattgccgatcgcattcgtgaacaaattgcgcgt
ggcgagcttaaacctggcgatgcgttacccactgaatcagcgctacaaacagagtttggc
gtcagccgggttacggtgcgtcaggctttgcgccagctagtcgagcagcagatcctcgaa
agcattcagggcagcgggacttacgtcaaagaagagcgggtcaattacgatatttttcag
ttaaccagttttgatgaaaaactgtcggaccgtcacgtcgatacacacagtgaaatcctg
atatttgaagtgattccggctgacgattttcttcagcaacagctacaaatcaccgcgcag
gatcgtgtgtggcatgtgaagcgcgtgcgctatcgcaagcaaaagccaatggcgctggaa
gaaacctggatgccgcttgcgttgttcccggatctcacctggcaggtcatggaaaattcg
aaatatcactttattgaagaagtgaagaagatggttatcgatcgtagcgaacaggaaatc
attcctctgatgccaaccgaagagatgagccgtctgcttaatatcagccagacaaagccg
attcttgaaaaagtatcgcgtggatatttagttgatggtcgggtgtttgaatatagccgc
aacgcttttaataccgatgactataaatttaccctgatagcgcagcgaaaatcatcgcga
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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