KEGG   Shigella sonnei Ss046: SSON_3650
Entry
SSON_3650         CDS       T00274                                 
Symbol
recF
Name
(GenBank) ssDNA and dsDNA binding protein
  KO
K03629  DNA replication and repair protein RecF
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SSON_3650 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssn03400]
    SSON_3650 (recF)
DNA repair and recombination proteins [BR:ssn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SSON_3650 (recF)
SSDB
Motif
Pfam: SMC_N AAA_15 AAA_23 AAA_21 AAA_27 AAA_29 AAA_16 ABC_tran AAA_13
Other DBs
NCBI-ProteinID: AAZ90198
ShiBASE_China: SSO3650
UniProt: Q3YWB4
Position
complement(3821059..3822132)
AA seq 357 aa
MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV
IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE
LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER
DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgtccctcacccgcttgttgatccgcgatttccgcaacattgaaaccgcggatctcgct
ttatctcccggctttaactttctggtaggtgccaacggcagtggcaaaaccagcgtgctg
gaagccatctatacgctcggccatggtcgggcgtttcgcagtttgcagattggtcgcgtc
attcgccatgagcaggaggcgtttgttctccacgggcgattacagggcgaagagcgcgag
acagcgattggcttaaccaaagacaaacagggcgacagcaaagtccgcatcgacggtaca
gacgggcataaggtcgcggaactggcgcacctgatgccaatgcagttgataacgccagaa
gggtttactttactcaacggcggccccaaatacagaagagcattcctcgactggggatgc
tttcacaacgaacccggatttttcaccgcctggagcaatctcaagcgattgctcaagcag
cgcaatgcggcgctgcgccaggtgacacgttacgaacagctacgcccgtgggataaagag
ctgatcccgctggcggagcaaatcagcacctggcgcgcggagtatagcgccggtatcgcg
gctgatatggccgatacttgtaagcaatttctccctgagttttctctgactttctctttc
cagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgc
gatcgccagctaacctacaccgcgcatggcccgcataaagcggacttacgcattcgcgcc
gacggtgcgccggtggaagataccttatcgcgtgggcagcttaagctgttgatgtgcgcc
ttacgtctggcgcaaggagagttcctcacccgtgaaagcgggcggcggtgtctctacctg
atagatgattttgcctctgagcttgatgatgagcgtcgcgggctgcttgccagccgctta
aaagcgacgcaatcacaggtctttgtcagcgcgatcagtgctgaacacgttatagacatg
tcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   SHIBASE_CHINA (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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