KEGG   Streptococcus sobrinus: DK181_04840
Entry
DK181_04840       CDS       T05567                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
ssob  Streptococcus sobrinus
Pathway
ssob03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DK181_04840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssob03400]
    DK181_04840
DNA repair and recombination proteins [BR:ssob03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DK181_04840
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_2 GIY_YIG_2
Other DBs
NCBI-ProteinID: AWN18797
Position
967598..969403
AA seq 601 aa
MNQLIKHKLELLPDSPGCYIHKDKNGTIIYVGKAKNLKNRVRSYFHGSHDTKTEMLVSEI
ADFEYIVTGSNTEALLLEINLIQENMPKYNIRLKDDKSYPYIKITNEVFPRLVITRQVHR
KDGIYFGPYPDSGAATEIKRLLDRIFPFKKCTNPANKVCFYYHLGQCKAHTVCHTDQAYW
DSLKEDVKNFLNGKDNKIVDQIKDKMLKASELMEFERAAEYRDLLEAISKLRTKQRIMNQ
DMKDRDIFGYYVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNEPEEDFLTYVGQFYRESKH
FLPKEVFIPQDIDADLVKAVVKTKVVKPQRGEKKQLVNLATKNARVSLQQKFDLLEKDIK
KTKGAIENLGQLLNIPAPRRIEAFDNSNIQGTSPVAAMIVFVDGKPSKKDYRKFKIKTVI
GPDDYASMREVIYRRYSRVMRDGLTPPDLIVIDGGQGQVNIAKDVIQNLLGLDIPIAGLQ
KNDKHQTHELLFGDPLEVIDLPRNSQEFFLLQRVQDEVHRFAITFHRQVRSKNSFSSKMD
GIPSLGPKRKQLLLKHFKSLTKIQQADVDDIVNCGVPRNVAQDLKARLTEMEKEKVPSDK
N
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgaatcaactgattaaacacaagttggagttgctgccggacagtcctggctgctacatc
cacaaggataaaaacggcaccatcatctatgttggtaaggctaagaatttgaaaaatcgg
gttcgctcttatttccatggcagtcacgataccaagacagagatgctggtctcagaaatt
gccgattttgagtatattgtaacgggctccaataccgaagccttactcctagaaatcaat
ctgattcaggagaatatgcccaagtacaatattcggctcaaggatgataagtcctaccct
tatattaagattaccaatgaggttttcccccgtctggttattacccgccaggttcaccgc
aaggacgggatttattttggtccctatccggactctggagctgccaccgaaattaagcgg
ctgctggatcggatttttccctttaaaaagtgtaccaatcctgccaacaaggtctgcttt
tattatcatttgggacaatgcaaggcccacaccgtctgtcacaccgaccaggcctattgg
gatagtctcaaggaggatgtcaaaaatttcctcaacggcaaggacaataagattgttgat
cagattaaggacaagatgctcaaggcttctgagcttatggaatttgagcgggccgccgaa
taccgtgacctgctagaagccatcagcaaactccgcaccaagcagcggattatgaaccaa
gacatgaaggaccgagatattttcggttactatgtggataagggttggatgtgtgttcag
gtcttctttgttcgccaggggaagttgattcagcgagatgtcaatatgttcccctactat
aatgagcctgaggaagatttcctgacctatgtcggccaattttatcgggaaagcaagcac
ttcctgcccaaggaagtctttattcctcaggatattgatgctgacttggtcaaggcagtc
gtcaagaccaaggtggtcaaaccccaacggggcgagaagaagcagctggtcaatctggcc
accaagaatgcccgagtcagcctgcaacaaaaatttgacctccttgaaaaagacatcaag
aagaccaagggagccatcgaaaatctgggccaactgctcaatattcctgccccccgacgg
attgaggcctttgataactccaatatccaaggaaccagtcccgttgctgccatgattgtt
tttgttgacggcaaacctagcaaaaaggactaccgcaagttcaagattaagaccgttatc
ggtcctgatgactacgccagtatgcgggaggtcatctatcgacgttatagccgggttatg
cgagatggcctgactccgcctgatttgattgttattgatggaggtcaaggtcaggtcaat
attgccaaggatgtcatccagaacctcctgggcttggatattcccatcgccggcctgcaa
aagaatgacaagcaccagacccacgagctcctcttcggcgaccccttagaggtcatagac
ctcccccgcaattcgcaagaattcttcctcctccaaagagtccaagatgaggttcaccgt
ttcgccatcaccttccaccgtcaggttagaagtaagaacagtttcagttccaaaatggat
ggtattccaagcttgggacctaaacgcaaacagctcctgctcaagcatttcaagagcctg
accaaaatccagcaagccgatgtcgatgacatcgtcaactgcggtgtccccagaaatgtg
gctcaggatttgaaggctagattgacggagatggagaaggagaaagtgcccagcgataag
aactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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