KEGG   Serratia surfactantfaciens: ATE40_021675
Entry
ATE40_021675      CDS       T06779                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ssur  Serratia surfactantfaciens
Pathway
ssur03420  Nucleotide excision repair
ssur03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATE40_021675
   03430 Mismatch repair
    ATE40_021675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssur03400]
    ATE40_021675
Enzymes [BR:ssur01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ATE40_021675
DNA repair and recombination proteins [BR:ssur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATE40_021675
   MMR (mismatch excision repair)
    Other MMR factors
     ATE40_021675
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22 PhoH
Other DBs
NCBI-ProteinID: AOF01726
Position
4642388..4644550
AA seq 720 aa
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNSIQYAWIRLLAGGN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISIYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtctccgatctgctcgatagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggggcgggcagcggcaagacgcgggtgctggtg
catcgcatcgcctggctgctgtcggtggagaactgctcgccgtattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccatcgtatcgaacatctgatcggtacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcatcgcctgctgcgcgcc
caccatctggaggccaacctgccgcaggatttccagatcctcgacagcgatgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgtcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgaaggcctgcggccgcagcacgtcgag
acctacaacaacccggtggaggccacctggttgcgcatctaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgagctgctgctgcgcgcgcatgaactgtgg
ctgaacaagccgcatatcctcaatcattaccgcgaacgtttcaccaacatactggtggac
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcaacgtgatgatcgtcggcgacgacgaccagtcaatctacggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggatttccccggcgcggaaaccatccgcctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaataccctgatcgccaacaac
gacgggcgcatgggtaaaaacctgtggaccgaaggcggcgaaggcgaaccaatttccatc
tactgcgccttcaacgagctcgacgaagcgcgctttgtggtcaatcgcatcaagacctgg
caagacaacggcggcgcgttgaacgactgcgccatcttgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagacggcgatgccgtaccgcatctacggcggccag
cgtttcttcgaacgccaggaaatcaaggacgcgctggcttacctgcgtcttatctccaac
cgcaacgatgatgcggcctttgagcgcgtggtcaacaccccgacgcggggcatcggcgat
cgcactctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acacgcgagctgatgcaggacaaggtgttggccggccgcgccgcgtccgcgctgcagcgt
tttatcgaactggtggagtcgctggcgcatgaaaccgctgacatgccgctgcatgtgcag
accgaccgggtgatccgcgattccgggctgttcatcatgtatgagcaggaaaagggtgaa
aaggggcaggcgcgcatcgaaaaccttgaggaactggtgacggcgacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaggcgggtgaaggccaggccgacgcctatcaggacgcggtgcaactgatgaccctgcac
tccgccaaggggctggagttcccgctggtgtttatcgtcggcatggaagaaggcatgttc
ccgagccagatgtcgctggatgaaggcggccggttggaagaggagcgccgcctggcctat
gtgggcgtaacgcgcgccatgcagaagctgacgctgacctatgccgaaacgcgccgtttg
tacggcaaagaggtgtatcaccggccgtcgcgctttatcggcgagctgccggaagagtgc
gtggaagaagtgcgcctgcgcgccagcgtatcccgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgacaccggctacaagctgggccagcgcgtgcgccatcccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gctttcccgggcgagggcatcaagtggctggtggcggcctacgctcgcctggaaacggta
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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