KEGG   Streptococcus suis 98HAH33 (serotype 2): SSU98_0410
Entry
SSU98_0410        CDS       T00515                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit K/omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ssv  Streptococcus suis 98HAH33 (serotype 2)
Pathway
ssv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSU98_0410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssv03021]
    SSU98_0410
   03400 DNA repair and recombination proteins [BR:ssv03400]
    SSU98_0410
Enzymes [BR:ssv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSU98_0410
Transcription machinery [BR:ssv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSU98_0410
DNA repair and recombination proteins [BR:ssv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSU98_0410
SSDB
Motif
Pfam: RNA_pol_Rpb6 TP_methylase
Other DBs
NCBI-ProteinID: ABP91568
UniProt: A4VZM9
Position
403368..403682
AA seq 104 aa
MMLKPSIDTLLDKVPSKYSLVILEAKRAHELEAGAKPTQEFTSVKSTLRALEEIESGNVV
IHPDPEAKREAVRRRAEEAKRLAEEEERKIKAQIAKEKEEGEKI
NT seq 315 nt   +upstreamnt  +downstreamnt
atgatgttgaagccgtcaattgataccttgttggataaggtaccatctaagtattctttg
gttattcttgaggctaagcgtgcccatgaattggaagcaggtgccaaaccaactcaagaa
ttcacctcagtgaaatccaccctacgcgccttggaagaaattgaatcaggtaatgtagtc
atccatccagacccagaagcgaaacgtgaggctgttcgtcgccgtgccgaagaggctaaa
cgtttggcggaagaagaagagcgtaaaatcaaagctcaaattgctaaagaaaaagaagaa
ggcgaaaagatttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system