KEGG   Sphingobium sp. SYK-6: SLG_25970
Entry
SLG_25970         CDS       T01622                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLG_25970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssy02044]
    SLG_25970
Secretion system [BR:ssy02044]
 Type IV secretion system
  Trb secretion system protein
   SLG_25970
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: BAK67272
UniProt: G2IJA2
Position
complement(2809032..2810240)
AA seq 402 aa
MSEAALQPAPKVDPETLVLRARPPRAIRFRRGIIIAIAAIGSASLIAVAWLALKPRIFRH
LDAQEELSQPNARLTSDALRGAPASYGDVPRLGPPLPGDLGRPILEHQQAMAAMAGPIDQ
QAQQIDAANSERRIAEQKAARESDVLVQSRQGSGTVDSLPAVPAAPAPASSADNGKVALD
PERDPNAQGRKAEFVSGLDPRGDTNPHPLVPAPSPYTLSAGSVIAASLITGIRSDLPGLV
TAQVTENVYDSATGGILLVPQGARLIGSYDSVVAFGQKRALVVWQRIMLPDGSSLRIDNV
PATDPSGYAGLQDKVDFHTWQLLKGVALSTLLGVSSELAFSGQSDLVKALRMATQDTVSR
AGDRITQRNLNIQPTITIRPGAPVRLVVHKDLILAPWHEQGD
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgagcgaagcagccctccagcccgcgcccaaggtcgacccagagacgctggtcttgcgc
gccaggccgccgcgcgcgatccggttcaggcgcggcatcatcatcgccatcgccgcgatc
ggctccgccagtcttattgcggtcgcctggctggcactgaagccgcgcatattccggcac
ctcgatgctcaggaagaattgtcgcagccgaatgcacgtctgacgagcgatgcgctgagg
ggagcgccggccagctatggcgatgtgccaaggctgggtccgccgctgccgggcgatctc
ggcaggccgatcctcgagcatcagcaggccatggctgcgatggccggcccgatagatcag
caggcgcagcagatcgacgcggccaacagcgagcgccggatcgccgagcagaaagctgcg
cgggaatcggatgtgctggtgcagagccggcagggtagcggcacagtcgacagcctgcct
gcggtgccggccgcccccgcgccggcctcctcggcggacaatggcaaggtcgcgctcgat
cccgagcgcgatccaaacgcccaggggcgcaaggccgaattcgtgagcggcctcgatccg
cgcggtgacacgaatccgcacccactcgtcccggccccgtcgccttacacattgtcggcc
ggcagtgtgatcgcggccagcctcataacgggcatcagatctgacctgcccgggctggtc
accgcccaggtgaccgagaatgtctatgacagcgccaccggcggtattctgctcgtgccg
cagggcgcgcggctaatcggcagctatgacagcgtggtggctttcgggcagaagcgtgcg
ctggtcgtctggcaacggatcatgctgccagacggcagctcgcttcgtatcgacaacgtg
ccggcgaccgatccctccggctatgccggattgcaggacaaggtggattttcacacttgg
cagctattgaaaggcgtcgctctgtcgaccttgctcggcgtcagttccgagctggccttc
tccggtcagagcgatcttgtgaaggcgctccgcatggcgacacaggatacagtatcgcgc
gccggcgaccggatcacccagcgcaatctcaacatccagccgactatcacgatccggccc
ggcgcgcccgtgcgcctggtcgttcacaaggatctgatcctggcgccctggcatgaacaa
ggagactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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