KEGG   Sphingobium sp. SYK-6: SLG_25990
Entry
SLG_25990         CDS       T01622                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLG_25990
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssy02044]
    SLG_25990
Secretion system [BR:ssy02044]
 Type IV secretion system
  Trb secretion system protein
   SLG_25990
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: BAK67274
UniProt: G2IJA4
Position
complement(2811187..2811987)
AA seq 266 aa
MIFRRPVQRYGRTPEPETPFQRAGQLWDERIGSARVQARNWRLMAFGGLGLAAALSGGLL
WQSMQSRVVPYVVEVDQLGEPRAVSPADATYRPTDPQIAWFLSRFIADVRGRSLDPVLMR
QNWLSAYDFVTTRGSVFLGEYARSANPFAGLGDRTVSVQVTSVVRASDTSFQVKWTETAW
ERGALAGRSRWTAILTVTVRPPKTADTLRKNPLGLYVDAIDWSRELETPADRPAPAPPRP
PANLPLGSPLDANPDAPAQPQPETRP
NT seq 801 nt   +upstreamnt  +downstreamnt
atgatcttcaggcgtccggtccagcgttatggacgaacccccgaaccggaaacaccgttt
cagcgtgccggccagctctgggacgaaaggattggctcagcccgcgtccaggcccgcaac
tggcggctgatggcattcggcgggctgggcctcgctgccgcgctgtccggcggcctgctg
tggcagtcgatgcagagccgcgttgtcccttatgtggtcgaggtggaccagctcggagaa
ccccgcgctgtcagtccggcggatgcgacatatcggccgactgatccgcagatcgcctgg
ttcctcagccgcttcatcgcggatgtccgcggtcgctcgctcgatcccgtgctgatgcgc
cagaattggctgtcagcctatgatttcgtgacgacgcgtggaagcgtcttcctcggcgag
tatgcccgctcggccaatcccttcgcgggtctcggcgacaggaccgtgtcggttcaggtg
acgagcgttgtgcgcgcatccgacacgagctttcaggtgaaatggaccgagacggcttgg
gagcgcggcgcgctcgcaggcaggtcgcgctggacagccatcctcaccgtgacggtcagg
ccgccgaagacagccgacacgctgaggaagaatccgctcggcctctatgtcgatgcgatc
gactggagtcgcgagcttgagacgccggccgaccggccggccccggcaccaccgcggcct
ccggccaatctgccactcggctccccgctcgacgccaaccctgatgctcccgcgcagccc
caaccggagacccgtccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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