KEGG   Sphingobium sp. SYK-6: SLG_26020
Entry
SLG_26020         CDS       T01622                                 
Name
(GenBank) conjugal transfer protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLG_26020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssy02044]
    SLG_26020
Enzymes [BR:ssy01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SLG_26020
Secretion system [BR:ssy02044]
 Type IV secretion system
  Trb secretion system protein
   SLG_26020
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_10 HerA_C AAA_16 ABC_tran FtsK_SpoIIIE DUF87 AAA_29 TraG-D_C AAA_7
Other DBs
NCBI-ProteinID: BAK67277
NITE: SLG_26020
UniProt: G2IJA7
Position
complement(2814158..2816605)
AA seq 815 aa
MLNLREYRHRADRLADHLPWAGLVADGVVLNKDGSFQRTLAFRGPDLGSATEAELISACA
RANNVLKRFGTGWALFFEAERRESQGYPDSAFPDAASWLLDEERRAGFEGEGEHYESRFH
LTLVWLPPADSSDAAGRSLVERPDAHEGRDWRSVLASFVAETDRALDLFGAFMPEMRALS
SAETLTYLHGAISERPHPIAMPDTPIYLDGLLADTPLIGGLEPMLGLSHIRTLTVTGFPN
MSRPGILDALNEAAFPYRWVTRFISLDKADATRVLTRLRRQWFNKRKSITALLREVMYNQ
PAQLLDSDADNKVIDADLALQALGGDHVAFGYLTATITVADEDRVRVEDKVRNVERIING
LGFTTIREGVNAVEAWLSSLPGQTYANVRQPIVHTLNLAHLMPLSSVWAGPARNAHLDGP
PLLVAQTAGSTPFRLSTHVGDVGHMMVVGPTGAGKSVLLALIALQFRRYAASQIYIFDMG
RSARAATLACGGAHHALGSGDDEGGLAFQPLRAIDDMAERAWASEWIVALLDQQKVVVDP
AIKEAVWSALGSLASAPPDERTITGLALLLQSNALRSAIASYTLEGPYGRLLDAAESRLA
LADMQCFETETLMNSTGAVAPVLTYLFHRLEERFDGRPTLLILDEAWKFLDHPLFAARIR
EWLKTLRKKNVGVVFASQSLADVAESSIAPAIIESCPQRILLPNDRAIEPQARAAYERFG
LNDRQIELIARATPKRHYYLQSARGNRLFELGLGPIALALCGASDPATQERIDSILAEQG
PDQFATHFLASTGLDWAAELLADFTAPHAPKEGVL
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgctgaacctgcgcgaatatcgccaccgcgccgaccgtctggccgaccatctgccctgg
gcggggctggtcgcggacggcgtcgttctgaacaaggatggcagcttccagcgcaccctg
gcgtttcgcggccccgacctcggaagcgcgaccgaagcggagctgatctcggcctgcgcg
cgggccaacaatgtcctcaaacgcttcgggaccgggtgggcgctgttcttcgaggcggaa
cggcgcgagagccaaggctatcccgatagcgcctttcccgatgcggcgtcctggctgctc
gatgaggaacggcgcgctggattcgaaggcgaaggcgagcattatgagagccgcttccat
ctgacgctggtctggctgccgcccgccgatagcagcgacgccgccggccggtcgcttgtg
gagcgtcccgatgcccatgaaggccgcgactggcgcagcgtgctcgcatctttcgtcgcc
gaaaccgatcgcgcgctcgacctgttcggcgccttcatgcccgagatgcgcgcgctctcc
tcggctgaaacgctgacctatctgcatggcgccatatcggagcggccgcatccgatcgcg
atgcccgatacgcccatctatctggatggactgttggccgacacgccgctcatcggtggc
ctcgagccgatgctggggctcagtcatatccgcaccctgaccgtcaccggcttcccgaat
atgagccggccgggcattctcgacgcgctcaatgaggccgcttttccctatcgctgggtg
acgcgcttcatcagtctcgacaaggccgatgcgaccagggtgctgaccaggctccggcgg
caatggttcaacaagcgcaagtcgatcaccgcgctgctgcgcgaggtgatgtataaccag
ccggcgcagctcctcgacagcgatgccgacaacaaggtgatcgatgccgatctcgcgctg
caggctttgggcggcgatcatgtcgcgttcggctatctcaccgccacgatcaccgtggcg
gatgaggatcgcgtgcgcgtggaggacaaggtccgcaacgtcgagcggatcatcaacggg
ctgggcttcaccacgatccgcgagggtgtgaacgcggtcgaggcatggctgtcgtcgctc
cccggccagacctatgccaatgtccgccagcccatcgtccacacgctgaacctggcccat
ctcatgccgctctcgtcggtatgggcgggaccggcgcgcaatgctcatctcgacgggccg
ccactgctcgtggcgcagaccgctggctcgaccccgttccggctctcgacccatgtcggc
gacgtcggtcacatgatggtcgttgggccgacgggcgccggcaagtcggttcttctggcg
ctgatcgcgctccagttccggcgctatgcagcgagccagatctatatcttcgacatgggg
cgttcggcccgcgctgcgacgctggcatgcggtggcgctcaccacgcgctcgggtccggc
gacgacgagggcggtctggccttccagccactgcgcgcgatcgacgacatggcggaacgg
gcctgggcgtccgaatggatcgtggctttgctcgaccagcaaaaggttgtggtcgatccg
gccatcaaggaagcggtctggtcggcacttggcagcctggcgtcggccccgcccgatgaa
cggacaatcaccggcctggccctcctgcttcagtccaatgcgctccggtccgcgatcgcc
agctatacgctcgaaggcccttatggacggctgctcgatgcggcggaaagccggctcgcg
cttgccgatatgcagtgcttcgagaccgagacgttgatgaacagcacgggcgcggtggcg
ccggtgctgacctatctcttccaccgcctggaggagcggttcgacggacggccaacgctg
ctcatcctcgacgaggcctggaagttcctcgaccatccgctgttcgccgcgcgcatccgc
gaatggctgaagacgctcagaaagaagaatgtcggtgtcgtcttcgccagccagagcctc
gccgacgtggccgaaagcagcattgccccggccatcatcgagagttgcccgcagcgtatc
ctgctgcccaatgatcgcgcgatcgagccgcaggcgcgcgccgcctatgagcggttcggt
ctcaacgaccgccagatcgaactgatcgcccgcgccacgccgaagcggcactattatctg
caatcggcgcggggcaatcggctgttcgagctgggattgggaccgattgcgctggcgctg
tgcggtgcgtccgatcccgccacgcaggagcggatcgacagcatcctggccgagcaaggg
ccggatcagttcgcgacccacttcctcgcttccactggcctcgactgggccgctgagctg
ctcgctgactttaccgccccccatgcccccaaagaaggagtcctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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