KEGG   Sphingobium sp. SYK-6: SLG_30290
Entry
SLG_30290         CDS       T01622                                 
Name
(GenBank) conjugal transfer protein TrbI
  KO
K20533  type IV secretion system protein TrbI
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLG_30290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ssy02044]
    SLG_30290
Secretion system [BR:ssy02044]
 Type IV secretion system
  Trb secretion system protein
   SLG_30290
SSDB
Motif
Pfam: TrbI gp12-short_mid
Other DBs
NCBI-ProteinID: BAK67704
UniProt: G2ILW1
Position
complement(3275257..3276474)
AA seq 405 aa
MTDPADNSPPEAAAPQAPRSDPQAFQLRGSTPRVMRLSRKALAAIGVVAGLGIGGSLIYA
LKPVGEKEAKELYSTDSRATSETITSGPRDYSQAPKLGPPLPGDLGGPIVSAQQRGENVP
VPPVGAQPDPGAQAEEAARQRAQQERDAARMSGVFLGGSSAGTAAMPSLPNLAIATPDAA
APQPVEAAQADQAAKRAFMAQASSQRTVSVERLVAPASPNIVQAGSIIPAALITGIRSDL
PGQITAQVTANVYDSITGRILLIPQGARLIGEYDSKVAAGQTRVLLAWDRLIMPDGRSIV
LERQPGADAAGYAGLQDRVNQHWGNLLKAAAVSTLLGVGAELGADSEDDLTRALRRGSQD
TINQTGQQIVRRQLNVQPTLTIRPGHPLRVVLMRDLVLEPVGGAR
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgaccgatcccgctgacaattccccgcccgaggccgccgcaccgcaagctccgcgctcc
gatcctcaagccttccagcttcgtgggtcgacgccgcgcgtcatgcgcctgtcgcgcaag
gcgctggccgccatcggcgtcgtcgccggcctcgggattggcggctcgctgatctatgcg
ttgaagcctgtcggcgagaaggaagccaaggaactctacagcaccgacagtcgcgccacg
tccgagaccatcacatcgggaccgcgcgattacagtcaggcgccgaaactcggcccgccg
cttcccggcgacctcggcggcccgatcgtctcggcccagcagcgcggggagaatgtcccg
gtcccgccggtcggcgcccagcccgacccgggcgcgcaggccgaggaagccgcccgccag
cgcgcccagcaggaacgcgacgcggcgcgcatgagcggcgtgttcctcggcggcagcagc
gccgggaccgctgcgatgccttcgctgccgaacctcgcaatcgcaacgcccgacgctgcc
gctccgcagcccgtcgaggccgcgcaggccgaccaggccgccaagcgcgcgttcatggcg
caggcgtccagccagcgcacggtgagcgtcgagcggcttgtcgcgccggcctcgcccaac
atcgtgcaggccggcagcattatcccggccgcgctcatcaccggcatccgctccgacctt
cccggccagattaccgcccaggtgacggcgaacgtctatgacagcatcaccgggcgcatc
ctgctcatcccgcaaggggcgcggctgatcggcgagtatgacagcaaggtcgccgccggt
cagacccgcgtgctgctcgcatgggaccgtctcatcatgccggacggccgctcgatcgtt
ctcgagcgccagcccggcgccgatgcggccggatatgccggcttgcaggaccgcgtgaac
cagcattggggcaatctgctcaaggccgccgccgtctcgacgctgctcggcgtgggtgcg
gagctgggcgcggacagcgaggatgacctgacccgcgcgctgcggcggggctcgcaggac
accatcaaccagaccggccagcagatcgtgcggcggcagctcaacgtgcagccgacgctc
accatccggccggggcatccgctgcgcgtggttctgatgcgcgatctcgtattggagccg
gttggaggcgcacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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