KEGG   Sphingobium sp. SYK-6: SLG_38610
Entry
SLG_38610         CDS       T01622                                 
Name
(GenBank) putative selenocysteine lyase
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
ssy  Sphingobium sp. SYK-6
Pathway
ssy00450  Selenocompound metabolism
ssy01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssy00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    SLG_38610
Enzymes [BR:ssy01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     SLG_38610
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     SLG_38610
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Imm48 Beta_elim_lyase DegT_DnrJ_EryC1 DUF5548
Other DBs
NCBI-ProteinID: BAK68536
NITE: SLG_38610
UniProt: G2IRY1
Position
complement(4147749..4149005)
AA seq 418 aa
MAGAPGRGFSGATLQTRAGAALRTDFPGLVTADGAPWHYLDTAATAQKPQAVIDATVRAM
GTDYATVHRGVYARSADMTLAFEAARRRVAQFINAPSENEIVFVRGATEGINLVAQSWGG
ANLKAGDRILLSTLEHHSNIVPWQLIAERTGAQIDVVPLTQDGRIDLDAMAAMIRAEHRI
VALAHVSNVLGSVLDVRRAADLAHGAGALLLIDGCQAAPRLAIDVQALGCDFYLFSGHKL
YGPTGIGVLWARGEILAAMPPYHGGGAMIDKVTFAGTTYAPPPARFEAGTPAIIETIGLA
AAIDYVEAIGLDVIAAHEDALVARTRAALREINAIRLLGPDDAAGIVSFVMEGVHPHDIG
TILDESGVAIRAGHHCAQPLMAHLGVEATARASFGLYSDESDIEALLKGLDRVRAIFG
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggctggggcaccggggcgcggtttctccggcgcgactctccagacgagagccggcgcc
gccctgcggaccgatttccctggcctcgtcaccgcggacggggctccctggcattatctg
gacacggccgcgacggcgcagaagccgcaggccgtgatcgacgcgaccgtgcgcgcgatg
ggcacggactatgcgacggtgcatcgcggtgtctatgcgcgctcggccgacatgacgctc
gcgttcgaggcggcgcgccgccgcgtggcgcagttcatcaacgcgccttcggagaacgag
atcgtcttcgtgcgcggcgcgaccgaggggatcaacctcgtcgcgcagagctggggcggc
gccaatctcaaggcgggcgatcgcatcctgctttcgacgctggagcatcacagcaacatc
gtgccctggcagctcattgccgagcggaccggcgcgcagatcgatgtcgtgccgctcacc
caggatggccggatcgatctcgacgccatggcagcgatgatccgggccgagcacaggatc
gtcgcgctggcccatgtgtccaatgtgctgggcagcgtgctggacgtacgccgcgcggca
gacctcgctcatggcgccggcgcgctgctgctgatcgatggctgccaggccgcgccgcgt
ctggccatcgacgtgcaggcgctgggctgcgatttctatctcttctccggccacaagctt
tatggcccgaccggcatcggcgtgctctgggcgcgtggcgaaatcctggccgccatgccg
ccttatcatggcggcggtgcgatgatcgacaaggtgacgttcgccggcacgacctacgcg
ccgcccccggcgcggttcgaggcaggcacgcccgcgatcatcgagacgatcgggctggcg
gccgcgatcgattatgtcgaggcgattgggctcgacgtcattgccgcgcatgaggatgcg
ctggtggcgcgcacgcgcgcggcactgcgtgagatcaacgcgatccgcctgctcgggccg
gatgacgcggcggggatcgtctccttcgtgatggaaggggttcatccgcacgacatcggc
accatattggacgagagcggcgtggccattcgcgcgggccatcattgcgcgcagccgctc
atggcgcatctgggcgtcgaggcgacagcgcgcgccagtttcggactctacagcgacgaa
agcgacatcgaggcgctgctcaaaggcctcgaccgcgtaagggcgatattcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system