KEGG T06258: EKG83

Saccharothrix syringae: EKG83_33460

Entry

EKG83_33460       CDS       T06258

Name

(GenBank) type IIA DNA topoisomerase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ssyi Saccharothrix syringae

Brite

KEGG Orthology (KO) [BR:ssyi00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssyi03032]
    EKG83_33460
   03400 DNA repair and recombination proteins [BR:ssyi03400]
    EKG83_33460
Enzymes [BR:ssyi01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     EKG83_33460
DNA replication proteins [BR:ssyi03032]
Prokaryotic type
  DNA Topoisomerases
   EKG83_33460
DNA repair and recombination proteins [BR:ssyi03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EKG83_33460

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

QFZ21652

UniProt:

A0A5Q0H7H3

Position

complement(8081479..8083521)

AA seq 680 aa
MTAEILYGADDLTHLEGLEAVRKRPGMYIGSTDSRGVNHLFTEIVDNSTDEGVAGHATRI
VVTLHADGSVQVDDDGRGIPTGTHAKSGLSGVELVLTRLHAGGKFGGSGYKTSGGLHGVG
ASAVNALSHRFDVVVRREGKTHEMSFAHGVPGVFDGPGPDADFTRQSGLRITGRTRKTGT
SIRYWHDARYFENGAALDVEGVRAKLRNTAFLVPGVTYVLRDITGGSPAEETFHYPGGLT
DMVDFLAPANDKPVSGTLLINGTGVYHENAADENGVMRSKVERHAEVEIALRWGTGYERT
VECFTNTIRNVHGGTHRRGFERAVLKAVQEAIGRTRGLLKPKEDPPTLDDVLEGMTAVVH
VRIPEPQFTSQTKDELSTAGITKVAQGIVEKHVRAWTEDRRTKGEAKIVLQKVVDAARVR
LTQKQQKDAARRKTALEGAAMPPKLVDCRTTGVSRSELFLVEGDSALGSARMARVSEYQA
LLPLRGKILNVQKASLADTLRNAEIASIVQVLGAGTGRTFDLGAMRYGRVILMADADVDG
SHIRTLLITLFAKYMRPVIEDGRLYAAMPPLHKVMTKGRNAETHFTFTQREMEQRVAQLE
KAGKTVVKPVPRFKGLGEMDADELWETTMNPATRSVRRITLHDAEAAEAALELLMGEKVE
PRRAWLVESAARVDQSAIDV

NT seq 2043 nt +upstreamnt +downstreamnt
gtgaccgctgagatcctgtacggtgccgacgacctgacccacctcgaaggtctggaagcg
gttcgcaagcgccccggcatgtacatcgggtccaccgacagcaggggcgtcaaccacctc
ttcaccgagatcgtcgacaactccaccgacgagggcgtcgcgggccacgccaccaggatc
gtcgtcaccctgcacgccgacggcagcgtccaggtcgacgacgacggccgcggcatcccc
accggcacccacgccaagtccggcctctccggcgtcgaactggtcctgaccaggctccac
gccggcggcaagttcggcggctccggctacaagacttccggcggcctgcacggcgtcggc
gcctccgccgtcaacgccctgtcccaccgcttcgacgtggtcgtccgccgcgagggcaag
acccacgagatgtccttcgcccacggcgtgcccggcgtcttcgacggccccgggcccgac
gcggacttcacccgccagtccggcctgcgcatcaccggccgcacccgcaagaccggcacc
tccatccgctactggcacgacgcccgctacttcgagaacggcgccgccctcgacgtcgag
ggcgtccgcgccaagctccgcaacaccgccttcctcgtgcccggcgtcacctacgtcctg
cgcgacatcaccggcggctcccccgccgaggagaccttccactaccccggcggcctgacc
gacatggtcgacttcctcgcgcccgccaacgacaagcccgtctccggcaccctgctgatc
aacggcaccggcgtctaccacgagaacgccgccgacgagaacggcgtcatgcgctccaag
gtcgagcgccacgccgaggtcgagatcgccctgcgctggggcaccggctacgagcgcacc
gtcgagtgcttcaccaacaccatccgcaacgtccacggcggcacccaccgccgcggcttc
gagcgggccgtgctcaaggccgtgcaggaggccatcggccgcaccaggggcctgctcaag
cccaaggaggacccgcccacccttgacgacgtgctcgagggcatgaccgccgtcgtccac
gtgcgcatccccgaaccccagttcacctcccagaccaaggacgagctgtccaccgccggc
atcaccaaggtcgcccagggcatcgtcgagaagcacgtcagggcctggaccgaggaccgc
cgcaccaagggcgaggccaagatcgtcctgcagaaggtcgtcgacgccgcccgcgtccgg
ctgacccagaagcagcagaaggacgcggcccgccgcaagacggcgctggagggcgccgcc
atgccgcccaagctggtcgactgccgcaccaccggtgtctcgcgcagcgagctgttcctg
gtggagggcgacagcgccctcggctcggcgcgcatggcccgcgtctccgagtaccaggcc
ctgctcccgctgcgcggcaagatcctcaacgtgcagaaggccagcctcgccgacaccctg
cgcaacgccgagatcgcctccatcgtccaggtcctcggcgcgggcaccggccgcacgttc
gacctcggcgccatgcgctacggccgggtcatcctgatggccgacgccgacgtcgacggc
tcccacatccgcaccctgctgatcaccctgttcgccaagtacatgcgcccggtgatcgag
gacggccgcctctacgccgccatgccgccgctgcacaaggtgatgaccaagggccgtaac
gcggagacccacttcaccttcacccagcgcgagatggagcagcgggtcgcccagctggag
aaggcgggcaagacggtggtcaagcccgtgccccggttcaagggcctcggcgagatggac
gccgacgagctgtgggagaccacgatgaacccggccacccgctcggtgcgccgcatcacg
ctgcacgacgcggaggccgcggaggccgcgttggagctgctgatgggtgagaaggtcgag
ccgcgccgggcgtggctcgtcgagtcggccgcccgggtcgaccagtccgcgatcgacgtc
tga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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