KEGG   Saccharothrix syringae: EKG83_35895
Entry
EKG83_35895       CDS       T06258                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ssyi  Saccharothrix syringae
Pathway
ssyi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssyi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EKG83_35895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssyi03021]
    EKG83_35895
   03400 DNA repair and recombination proteins [BR:ssyi03400]
    EKG83_35895
Enzymes [BR:ssyi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EKG83_35895
Transcription machinery [BR:ssyi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EKG83_35895
DNA repair and recombination proteins [BR:ssyi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EKG83_35895
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QFZ22077
UniProt: A0A5Q0H786
Position
complement(8678160..8678438)
AA seq 92 aa
MTTHTELGPLSGSPEGITNPPIDDLLEQVSSKYALVIYAAKRARQINDYYAQLGEGLLEY
VGPLVEPGPREKPLSIALREIHAGLLEHTEGE
NT seq 279 nt   +upstreamnt  +downstreamnt
gtgaccacgcacaccgagctgggcccgctgtcgggttccccggagggcatcaccaacccg
ccgatcgacgacctgctggagcaggtcagctcgaagtacgcgctggtgatctacgcggcc
aagcgggcgcgccagatcaacgactactacgcccagctcggcgagggcctgctggagtac
gtcggcccgctggtcgagccgggcccgcgcgagaagccgctgtcgatcgcgctccgggag
atccacgcgggtctcctcgagcacaccgagggcgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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