KEGG   Saccharothrix syringae: EKG83_39100
Entry
EKG83_39100       CDS       T06258                                 
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ssyi  Saccharothrix syringae
Brite
KEGG Orthology (KO) [BR:ssyi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ssyi03016]
    EKG83_39100
Enzymes [BR:ssyi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     EKG83_39100
Transfer RNA biogenesis [BR:ssyi03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    EKG83_39100
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: QFZ22641
UniProt: A0A5Q0H8V3
Position
complement(9366325..9366798)
AA seq 157 aa
MNLFTALFPPPEAVAELDGALDPLRRAHPRLRWADPARWHVTVRFFGPVDPDAHHAAHLA
DLAGVPAPTLRLAGSGHFRQVLWIGVEGPLAELGEAARVVDWHPHLTVARARRRDDELPL
PAFTGREWTATEVALVRSGPPAGYTVLDRVPLSTPNG
NT seq 474 nt   +upstreamnt  +downstreamnt
gtgaacctcttcaccgccctcttcccgccccccgaggcggtggccgagctggacggggcg
ctggacccgctgcgccgggcccacccccggctgcgctgggccgaccccgcccgctggcac
gtcaccgtccgcttcttcggcccggtcgaccccgacgcgcaccacgccgcgcacctcgcc
gacctggccggcgtgcccgcacccaccctccggctcgccggcagcggccacttccggcag
gtcctctggatcggcgtggagggcccgctggccgagctgggcgaagccgcccgggtggtg
gactggcacccccacctcaccgtcgcccgcgcccgccgccgcgacgacgagctgccgctg
cccgccttcaccggtcgggagtggaccgccaccgaggtcgcgctggtccgcagcggcccg
cccgcgggttacaccgtgctcgaccgcgtgcccttgagcacgccaaacgggtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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