KEGG   Serratia symbiotica: SCc_097
Entry
SCc_097           CDS       T01672                                 
Symbol
groEL
Name
(GenBank) chaperone Hsp60
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ssz  Serratia symbiotica
Pathway
ssz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCc_097 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssz03019]
    SCc_097 (groEL)
   03110 Chaperones and folding catalysts [BR:ssz03110]
    SCc_097 (groEL)
   03029 Mitochondrial biogenesis [BR:ssz03029]
    SCc_097 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssz04147]
    SCc_097 (groEL)
Enzymes [BR:ssz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SCc_097 (groEL)
Messenger RNA biogenesis [BR:ssz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SCc_097 (groEL)
Chaperones and folding catalysts [BR:ssz03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SCc_097 (groEL)
Mitochondrial biogenesis [BR:ssz03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SCc_097 (groEL)
Exosome [BR:ssz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCc_097 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   SCc_097 (groEL)
  Exosomal proteins of breast cancer cells
   SCc_097 (groEL)
  Exosomal proteins of colorectal cancer cells
   SCc_097 (groEL)
  Exosomal proteins of bladder cancer cells
   SCc_097 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 REF
Other DBs
NCBI-ProteinID: AEW44283
Position
complement(157491..159137)
AA seq 548 aa
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTASVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKKLSVPCSDFKAIAQVGTISANSDETVGKLIAEAMEKVGKKGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPENGSVELESPFILLVDKKISNIREMLPILESV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGAV
ISEEIGLELEKTTIEDLGQAKRVVINKDTSTIIDGVGNEVAIKGRVAQIRQQIEEASSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKSRVEDALHATRAAVEEGVVAGGGVALI
RVAGKISNLRGDNEDQNVGIKVAMRAMESPLRQIVINAGEEASVVANNLKAGEGSYGYNA
CSEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMITDLPKTDAPDVSNTGGMGG
MGGMGGMM
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtaaaatttggcaatgatgctcgtgtgaaaatgcttcgcggagta
aatgttctagctgatgcagtaaaagtaacactaggcccaaaaggtcgtaatgtagtacta
gataaatcttttggcgctcctactatcaccaaagatggtgtatccgttgctcgtgagatc
gaattagaagataaattcgaaaacatgggcgcacaaatggtaaaagaagtagcctctaaa
gcaaatgatgcggcgggtgacggcacaacaacagcaagcgtattagctcaatccattgtt
actgaaggcctcaaggctgtagccgcaggcatgaatccaatggatctgaaacgtggtatc
gataaagctgttgtggctgcggttgaagagttaaaaaaactgtcagtaccttgttctgac
tttaaggctattgcccaagtaggtaccatatctgcaaactccgatgaaaccgtaggaaaa
ttaattgcggaagccatggaaaaagttggtaaaaaaggcgttatcactgttgaagaaggt
actggcctacaagatgagctagacgtagtggagggtatgcaatttgatcgcggctaccta
tccccttacttcattaacaaaccagaaaatggctctgtagaattagaaagcccattcatt
ctattagtggacaaaaaaatttccaacatccgtgaaatgctacctatattagaatctgta
gcaaaagctggaaaaccactactaattatcgctgaagacgttgaaggtgaagcattagct
actttagtagttaatactatgcgtggtattgtaaaagttgctgctgttaaagcaccaggt
ttcggtgatcgtcgtaaagctatgctgcaagatattgcaaccctgacaggtggcgcagtt
atctctgaagagattggtttagaattagagaaaaccacaatagaagatttgggtcaagct
aaacgcgtggtgattaataaagatacatctactataattgatggcgtaggtaatgaagtg
gccatcaaaggtcgcgtagcgcaaattcgtcaacaaatcgaagaagcgagttctgattac
gatcgcgaaaaacttcaagaacgcgtagctaaattagctggtggcgttgccgttattaaa
gttggtgcagcaactgaagttgaaatgaaagagaagaaatctcgtgttgaagatgccctt
catgcaactagagcagcggtagaagaaggcgtggttgctggtggtggtgttgctctaatc
cgtgtagcaggcaaaattagcaacctgagaggtgacaatgaagatcaaaatgttggcatt
aaggttgcaatgcgtgcaatggaatctccattacgccaaattgtaattaatgctggtgaa
gaagcttctgttgttgctaataacctaaaagcaggggaaggtagctacggttataatgct
tgctctgaagagtatggcgacatgattgcgatgggtatcttggatccaactaaagtaacc
cgctctgctctacagtatgcggcttctgtggctggcctcatgattactactgaatgcatg
attaccgatcttccaaaaactgatgcacctgatgtaagtaatactggtggcatgggtggc
atgggtggcatgggtggcatgatgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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