KEGG   Spirochaeta thermophila DSM 6192: STHERM_c09340
Entry
STHERM_c09340     CDS       T01315                                 
Name
(GenBank) hypothetical protein
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sta  Spirochaeta thermophila DSM 6192
Pathway
sta02020  Two-component system
sta02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    STHERM_c09340
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    STHERM_c09340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sta03021]
    STHERM_c09340
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sta02035]
    STHERM_c09340
Transcription machinery [BR:sta03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     STHERM_c09340
Bacterial motility proteins [BR:sta02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    STHERM_c09340
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_37 IF2_N HTH_23 DUF3243 Cas9_a GerE HTH_WhiA
Other DBs
NCBI-ProteinID: ADN01881
UniProt: E0RS94
Position
1023420..1024208
AA seq 262 aa
MDERSLAQRTEDELWKEYQKTRDPQIREYFIKQYAPLVKYVAGKIAVGLPSSVEFDDLIG
FGTFGLLDAIEKFDPEKHVKFKTYAVTRIRGAIYDELRAMDWVPRSVRQKSREIEDALHR
LESSLGRAATDEELAREMNMSSRELQKTLQKISSTSILSLQELWYTGDENDRVAIADMLE
APQAYDPAARVEREEIKRVVAEAIKELPEKEKKVLVLYYYEDLTLKEIGAILNVTESRVS
QLHTKAISRLRVKLRNIRKGIF
NT seq 789 nt   +upstreamnt  +downstreamnt
atggatgaacgcagcctggcgcagaggacagaagacgagctctggaaggaatatcagaag
acaagggatccccagatccgtgagtacttcatcaagcagtacgccccactcgtgaaatac
gttgcgggaaagatcgcggtggggctccccagcagcgtggagttcgacgatctgatcggc
ttcgggacgttcggactcctcgatgcgatcgagaaattcgaccccgaaaaacatgtgaag
ttcaagacctatgcggtcaccaggataagaggcgccatctacgacgaactccgtgcaatg
gactgggtccctcgttcggtacggcagaagagcagggagatagaggacgccctccacagg
ctcgagagttccctggggagggccgccaccgacgaggaactcgcccgggagatgaatatg
agctcgcgtgagctccagaagacactccagaagatcagttccacttccatcctctccctg
caggaactctggtacacaggagacgagaacgatcgggtggccattgcggatatgctcgaa
gccccccaggcctatgatccggccgcccgcgtggagcgggaggagataaagcgggtggtg
gcggaagccataaaagagcttcctgaaaaggaaaagaaggtcctcgtgctctattactac
gaagatttgactttgaaggaaatcggggctatccttaatgtgacggagtccagagtgtct
cagctccataccaaggcgatcagccggctcagggtgaagctgaggaacatacgtaaaggt
atcttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (37)   

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