KEGG   Spiroplasma taiwanense: STAIW_v1c06070
Entry
STAIW_v1c06070    CDS       T02742                                 
Symbol
nfo
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
stai  Spiroplasma taiwanense
Pathway
stai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:stai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    STAIW_v1c06070 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stai03400]
    STAIW_v1c06070 (nfo)
Enzymes [BR:stai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     STAIW_v1c06070 (nfo)
DNA repair and recombination proteins [BR:stai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     STAIW_v1c06070 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2 DUF2124
Other DBs
NCBI-ProteinID: AGR41229
UniProt: S5LU25
Position
complement(586808..587713)
AA seq 301 aa
MKKPDFYLGSHVGMNGVGKFLVGSALEAIQNNANTLMFFTGAPQNTRRTETEKLNIKEFK
ELLIENEIDITKVICHGPYTINLANTVKQETFDFGVRLLKEELIRLEAIGVHLLVLHPGA
AVGALKEDALKSVAKGLNLVYKELPNSPVKIALETMSGKGTEVCITFEEIKTVLDLVEQK
EKVGVCFDTCHMHDAGYDVKNNFDKVVEEFDNIVGLEKLMAIHLNDSKNSISSHKDRHEN
IGYGYIGFDALCKVVHNPLFKEIPILLETPWLDAKTSPYKVEIEMLKEKKFTNPFNDKEI
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaaaacctgatttttatcttggaagccatgttggaatgaacggggttggaaaattt
ttagttggaagtgcacttgaagcaatccaaaacaatgcaaatactttaatgttttttaca
ggagcaccacaaaatactcgaagaacagaaactgaaaaattaaatataaaagaatttaaa
gaattattaattgaaaacgaaattgatattacaaaagtaatttgtcatggtccatataca
attaacttagcaaatacagtaaaacaagaaacttttgattttggtgtaagactattaaaa
gaagaattaattagacttgaagcaattggggttcacttacttgttttacacccaggagct
gctgttggggcattaaaagaagatgctttaaaaagtgttgctaaaggcttaaatttagta
tataaagaattgccaaattcaccagtaaaaatagcattagaaacaatgtctggaaaaggg
actgaagtttgtatcacttttgaagaaatcaaaacagtattggatctagtagaacaaaaa
gaaaaagttggagtatgctttgatacatgtcatatgcatgatgcaggatatgatgtaaaa
aataactttgataaagttgtagaagaatttgacaatattgttggattggaaaaattaatg
gctattcacttaaatgatagtaaaaattcaatttcttctcataaagatagacatgaaaat
attggttatggatatattggttttgatgcactttgtaaggtagttcacaaccccttattt
aaagaaattccaattttgcttgaaactccttgacttgatgcaaaaacaagtccttataag
gttgaaatagaaatgttaaaggaaaaaaaatttacaaatccatttaatgataaagaaata
aagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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