KEGG   Sphingomonas taxi: MC45_03680
Entry
MC45_03680        CDS       T03398                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
stax  Sphingomonas taxi
Pathway
stax03420  Nucleotide excision repair
stax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:stax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MC45_03680
   03430 Mismatch repair
    MC45_03680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stax03400]
    MC45_03680
Enzymes [BR:stax01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MC45_03680
DNA repair and recombination proteins [BR:stax03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MC45_03680
   MMR (mismatch excision repair)
    Other MMR factors
     MC45_03680
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PcrA_UvrD_tudor AAA_12 Terminase_6N
Other DBs
NCBI-ProteinID: AIT05652
UniProt: A0A097EDL8
Position
839298..841586
AA seq 762 aa
MTDLSAPANALQDPPYLKGLNPPQRDAVLTTEGPVLMLAGAGTGKTAALTARLAHLLWTR
KAWPSEILSVTFTNKAAREMRERVGRLVGDAVEGMPWLGTFHAIGAKMLRRHAELVGLQS
NFSILDTDDQLRLLKQLILAADLDEKRFPARSLAGLIDDWKNKGLVPADIDAGESERYAN
GRGGELYAQYQERLKALNACDFGDLLLHMLTVLKTYPEVLKMYQERFKYIMVDEYQDTNV
VQYLWLRLLAQARKNIACVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTP
HILGAASGVIANNGGRLGKTLWTELDAGEKVRVLGVWDGPEEARRVGEEIEAAQRSGKSL
DEVAILVRAQHQTREFEDRFIAIGMPYRIIGGFRFYERAEIRDALAYLRIVNQPSDDLAF
ERIVNVPKRGLGDKALAKIHQLARIEGIPLTIAAARILDTDELTPQARRALGNLVGDIAR
WRDMARDLPHAELARQLLDESGYTAMWQAEKSVDAAGRLENLSELVRAMEEYESLGAFLE
HVSLVMDKEGGVQDPQVTIMTIHAAKGLEYDTVFLVGWEEGLFPSQRSLDEGGTKSLEEE
RRLAYVAITRARRRATILHAANRRIYGQWTSSIPSRFVGELPPEHTDAETTMSGGESLWR
ANWSERADPFADVGRGTGRGPGWQRAAGSGSGFSTAPTRVVESRSSAVSIGNKGRSDLSV
GLRVFHQKFGYGAIAEIEGNKLEIDFEAAGRKRVMDSFVTIG
NT seq 2289 nt   +upstreamnt  +downstreamnt
gtgaccgatctcagcgcccccgccaacgccttgcaggacccgccctatctcaaggggctc
aacccgccgcagcgcgacgcggtcctgaccaccgaaggcccggtgctgatgctcgccggc
gccggcaccggcaagaccgccgcgctcaccgcccggctcgcgcacctgctgtggacgcgc
aaggcgtggccgtccgagatcctcagcgtcaccttcaccaacaaggcggcacgcgagatg
cgcgagcgcgtcggccggctcgtcggcgacgcggtcgagggcatgccgtggctcggcacc
ttccacgcgatcggcgccaagatgctgcgccgccacgccgaactggtcgggctgcagagc
aatttcagcatcctcgacaccgacgaccagctccggctgctgaaacagctcatcctcgcc
gccgatctcgacgagaagcgtttccccgcgcgcagtctcgccgggctgatcgacgactgg
aagaacaaggggctggttcccgccgatatcgatgccggcgaaagcgaacgctatgccaac
ggccgcggcggcgaactctacgcgcaatatcaggagcggttgaaggccctcaacgcctgc
gatttcggcgatttgctgctgcacatgctgaccgtgctcaagacctatcccgaggtgctg
aaaatgtaccaggagcggttcaaatacatcatggtcgacgaatatcaggacaccaacgtc
gtccagtatctctggctgcgactgctcgcgcaggcgcgcaagaacatcgcctgcgtcggc
gacgacgaccagtcgatctattcgtggcgcggcgcgcaggtcgagaacatcctcaagttc
gagaaggactttccgggtgcgaaggtgatccggctcgaacagaattaccgctcgacgccg
catatcctcggcgccgcctcgggcgtcatcgccaacaacggcggccggctcggcaagact
ttgtggaccgaactcgacgcgggcgagaaggtgcgcgtgctcggcgtctgggacggcccc
gaggaggcgcgccgcgtcggcgaggagatcgaggcggcacagcgcagcggcaagagcctc
gacgaggtggccatccttgtccgcgcgcagcatcaaacgcgcgaattcgaggaccgcttc
atcgcgatcggcatgccctatcgcatcatcggcggcttccgcttctacgaacgcgccgag
attcgcgacgcgctcgcttatctgcgcatcgtcaaccagccgtccgacgacctcgccttc
gaacggatcgtcaacgtccccaagcgcgggctcggcgacaaggcgctcgccaagatccac
cagctcgctcggatcgagggcataccgctgaccatcgccgcggcgcgcatcctcgacacc
gacgaactgaccccgcaggcgcgccgcgcgctcggcaacctggtcggcgacatcgcccgc
tggcgcgacatggcgcgcgacctgccgcatgccgagctcgcccgccagttgctcgacgag
agcggctataccgccatgtggcaggcggagaaatcggtcgacgccgccggccggctcgag
aacctgtccgaactcgtccgcgcgatggaggaatatgaatcgctcggcgcgttcctcgaa
cacgtcagcctcgtcatggacaaggagggcggcgtccaggacccgcaggtgacgatcatg
acgatccacgccgccaagggcctggaatacgacaccgtcttcctcgtcggctgggaggag
gggctgttcccgtcgcagcgctcgctcgacgagggcggcaccaagagcctcgaggaggaa
cgccgcctcgcctatgtggcgatcacccgcgcgcggcggcgcgcgacgatcctccacgcc
gccaaccgccgcatttacggccagtggacgtcgagcattccgagtcgcttcgtcggcgaa
ctgccccccgaacataccgatgccgagacgacgatgtcgggcggggagagcctgtggcgc
gcgaactggagcgaacgcgccgaccccttcgccgacgtcggccgcggtaccggccgcgga
cccggctggcagcgcgcggcgggcagtggctcgggcttctcgaccgcgccgacgcgcgtc
gtcgaaagccggtcgagcgcggtcagcatcggcaacaaggggcgcagcgacctttcggtc
ggcctgcgcgtcttccaccaaaagttcggctatggcgcgatcgccgagattgaaggcaac
aagctcgagatcgacttcgaggcggcgggccgcaagcgcgtgatggacagtttcgtcacg
atcgggtga

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