KEGG   Streptococcus thermophilus LMD-9: STER_0095
Entry
STER_0095         CDS       T00414                                 
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
ste  Streptococcus thermophilus LMD-9
Pathway
ste03030  DNA replication
ste03430  Mismatch repair
ste03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ste00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    STER_0095
   03430 Mismatch repair
    STER_0095
   03440 Homologous recombination
    STER_0095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ste03032]
    STER_0095
   03400 DNA repair and recombination proteins [BR:ste03400]
    STER_0095
Enzymes [BR:ste01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     STER_0095
DNA replication proteins [BR:ste03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     STER_0095
DNA repair and recombination proteins [BR:ste03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     STER_0095
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 RNase_H_2 tRNA_anti-codon HHH_3 Rv2179c-like DEDDh_C DNA_pol_A_exo1 DUF4251 B YhfH
Other DBs
NCBI-ProteinID: ABJ65449
UniProt: Q03MX3
Position
72798..77192
AA seq 1464 aa
MSDKFKLLLKQIHFPQHEEAYNEIKSGSIESVKLFKSKRQWFFVFSFRNLLSYETFTLFD
NLLHSSFDSLGAKVSYMINVEDISCDQSLLEAYFSYALDILKSSHFSIYSLFSNLGIEIS
NNSISVKAPAHILRENLHERFIALIADVLSNVGLSNVSISVLEDKEASSSLEEAYETNKI
SLQEEAESQARQALQSIVQSSPVPPPQKHQAQNFAEKQSQRVASFDKAEITPMIEVNSEE
NRIVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSEELVKFGMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAIPTVEEL
IDTAAFWGHPAVAITDHANVQSFPHGYHKAKKAGIKAIFGLEANLVEDKVPIVYNSENLE
LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIVEQFDEFIDPGYPLSAFTTELTGI
TDNHVKGAKPLVQVLQEFQEFCKGAVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE
FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFEKHGLTNLEQ
LNTELVSDDSYKKSRVKHATLYVQNQTGLKNLFKLVSLSNVSYFEGVARIPRKVLDEYRE
GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEGAIEQ
LIKDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKGENAQPAP
LPEAHFRTTNEMLDEFAFLGKDLAYEIVVANTQAMANQIEEVEVVKKDLYTPYIDRAEEQ
VAEMTYAKAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPKCQHSEFITDGSYGSGFDLPDKECSECGTEYK
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYNKFYRDAEVDRLAMGVAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL
FSGTEVLGVTPEQIGTSTGVLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNG
YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA
KAFELKTMSAGLDAVKARMEDIKEKRQRNEATNLENDLFTTLEIVNEMLERGFTFGQLDL
YKSQATEFLIEGDTLIPPFIALEGLGENVAKQLVAAREEGEFLSKTELRKRGGLSSTLVE
RLDEMGILGNMPEDNQLSLFDDFF
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgtctgataaatttaagcttcttttaaaacaaattcattttccacagcatgaggaagct
tataatgaaattaaaagtggttctattgaatcagtaaagctatttaaatcaaaacgtcag
tggttttttgttttttctttcagaaatctactgtcatatgagactttcactctttttgat
aatctgcttcattcttcttttgattctttaggggctaaagtttcatatatgattaatgta
gaagatatttcttgtgatcaatctttacttgaagcttatttttcatatgctttagatatt
ttaaaatcatcacacttttcaatctattccctattctccaatttggggattgagatttct
aataatagtatttctgttaaggctcctgcgcatatccttagagagaatttacatgagaga
tttatagccctgattgctgatgttctttcgaatgttggtttatctaatgtttctatttcg
gttcttgaggataaagaagcttcatcctctcttgaagaggcttacgagacaaataagatc
tccttacaagaagaggcagaatctcaagctagacaagcacttcaatcaattgttcaaagt
tcgccggtaccaccacctcagaagcatcaggcccaaaattttgctgagaaacaaagtcaa
cgagttgcaagctttgataaggctgagattactccaatgattgaagtcaattctgaagaa
aataggattgtttttgaaggatatatttttgatgtagagcaacgtgaaacgaaaacaggt
aggattataataaattttaaggtaactgattatacctctagttttgctatgcaacgttgg
gtgaaggatagcgaagaacttgttaagttcggtatgattaaaaaaggaaactgggtaaga
gttcgaggtcgtattgagaataatccttttacacatagtttgactatgaacgtacaagat
attaaggaaatttctcatactcctcgtaaggatttgatgcccgagggacagaagcgagtt
gaatttcatgctcatactaacatgtcaactatggatgctataccaacagttgaagagctc
atcgatacagcggctttttggggacatccagcagttgcgataacagatcatgcaaatgtt
caaagttttcctcatggctaccataaagctaagaaagctggaattaaggcgatttttggt
cttgaagccaatcttgttgaggacaaagttcctattgtttataattccgaaaatttggaa
ttaaaagaagcaacttatgttgtattcgacgtagaaacaacaggtttgtctgctgttcat
aatgatttgatccagattgcggcatcaaaaatgcataaaggtaatattgttgagcaattt
gatgaattcattgatcctggatatccgctttctgcgtttacgactgaattgactggtatt
actgataatcatgttaaaggtgccaaacctttagtgcaagttttacaggagtttcaagaa
ttctgtaaaggagctgtgctagtcgcccacaatgcgacctttgacgttgggtttatgaat
gccaattatgaaagacatcagttaccgacaatctcacaaccggttattgatactttagaa
tttgcacggaatctttatcctgagtataaacgtcatggtttgggtcctttgacaaagcgt
tttggcgttgccttggaccaccaccacatggccaactatgatgcggaagcaacaggtcgt
ttgttgtttattttcattaaagatgtattcgaaaagcatggattgactaatctggaacag
ttgaacacagaattggtctctgatgattcgtataagaagtctcgtgtcaaacatgcgaca
ctatatgttcagaatcaaacgggtttgaagaatctctttaaattggtaagcctatcaaat
gtatcatattttgagggagtagcccgtattcctcgtaaggttttagatgagtatcgtgag
ggaatcatagtcggttccgcatgtgcagatggtgaagtttttgatactctcttgtctcat
ggtattgataaggcagttgaagttgctaaatactatgattttattgaagttatgccacca
gcgatttatgcgccattgattgcaaaggatttaatcaaggatgagggagctatagaacaa
cttattaaagatttgattgaagttgctaatcgtcttgacaagcctgtgcttgctacggga
aatgtacattatatcaatcctgaagatgccatttatcgtgaaatcattgttcgtgctttg
ggacaaggagctatgatcaatagaccaattggtaagggggaaaacgctcaacctgctcct
ctaccggaagctcattttagaacaaccaatgagatgctagacgaatttgcctttttgggg
aaagacttagcctatgaaattgttgtagctaatacacaagctatggcaaatcaaatcgaa
gaggttgaagtcgtcaaaaaagacttgtatacaccttatattgatcgtgcagaagaacag
gttgcagagatgacttatgctaaagcatttgagctttatggtaatcctttgcctgatatt
attgacttgcggattgagaaagagttgtcctcaattcttggtaatggatttgccgtaata
tatctagcatcgcagatgctggtgaaccgttcaaatgaacgtggctacctggttggctct
cgggggtctgttggctctagttttgttgcaacaatgattggaattactgaggtaaatcct
atgccacctcattatttatgtcctaaatgccaacactcagagtttatcacggatggttct
tatggctctggctttgatttgcctgataaggagtgctcagaatgtggaactgagtataaa
aaagatggtcaggatattcctttcgagaccttcctcggttttgatggggataaggttcct
gatattgatttgaacttctcaggagatgatcagccgtcggctcacttggatgtacgtgat
atttttggagagcaatatgccttccgtgctggaacggtaggtactgttgcagatcggaca
gcttatggttttgtcaagggttacgaacgtgattacaataagttctatcgtgatgctgag
gttgatcgtttggctatgggtgttgctggggttaagcgaaatacaggtcagcacccaggt
ggtatcgttgttattccaaattatatggatgtctatgattttacacctgttcaatatccg
gctgatgatgtaactgctgcttggcagacaactcactttaacttccacgatatcgatgag
aacgtgttgaagctagatattctgggacatgatgatccgactatgattcgtaagttacag
gacctatcaggaattgatccaaaggatattcgagcagatgatccggatgtgatgaaactt
ttttcagggactgaggttttaggggtaacgcctgaacaaattgggacctcaacgggcgtg
ttgggaatccctgagtttgggactaactttgttcgtggtatggtcgaagagacgcatccg
acgacctttgcggaactcttacagttatctggtttatcccatggtacagatgtttggttg
ggtaatgcacaagatttgattaaggaaggtattgccaccctgaaaacagttatcggttgt
cgtgacgatatcatggtatacctaatgcatgcagggttagatcctaagatggcctttacc
attatggaacgtgtgcgtaagggaatgtggttgaaaatttctgaagaagagcgaaatggt
tatattcaagccatgcgtgaaaataatgttccggactggtatattgaatcttgtggtaaa
atcaagtacatgttccctaaagcccatgcggctgcctacgttatgatggcccttcgcgta
gcttatttcaaggtgcaccatcctatttattactattgtgcttacttctcgattcgagcc
aaagcatttgagcttaagacgatgtctgcagggctcgatgctgttaaagctcgaatggaa
gatattaaggagaagcgccaacgaaatgaagctactaatcttgaaaatgacttgtttaca
acgcttgaaattgtcaatgaaatgttagaacgtggctttacttttggccagttagatctt
tataagagtcaggcgactgaatttttgattgaaggagataccttgattcctccgtttatc
gcacttgaaggtttgggtgaaaacgttgcgaagcaattggttgctgcgcgtgaagaaggg
gaattcctctccaaaacagaattgcgtaaacgaggaggcctatcatcaaccttggttgaa
agattagatgaaatgggcattctaggaaatatgccagaagataatcagttaagtcttttt
gatgatttcttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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