KEGG   Streptococcus thermophilus LMD-9: STER_0669Help
Entry
STER_0669         CDS       T00414                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ste  Streptococcus thermophilus LMD-9
Pathway
ste03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ste00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    STER_0669
Enzymes [BR:ste01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     STER_0669
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     STER_0669
DNA repair and recombination proteins [BR:ste03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     STER_0669
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS FbpA Zn_Tnp_IS1595 dCMP_cyt_deam_1 zf-TFIIB Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID: ABJ65929
Position
606516..607337
Genome map
AA seq 273 aa AA seqDB search
MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL
IFDFGQLIIISHLRMEGKYLLFTDQVPDNKHFHLFFKLDDGSTLVYQDVRKFGTFDLLDR
KQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGLGNIYVDEVLW
AAKVHPETPANKLSKAAMKRVHDQTIAILQLGIAKGGSTIRTYRNALGEDGTMQNYLQVY
GKTGQPCPRCASMIVKIKLGGRGTHLCPHCQKR
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttacctgaggtagaaacagttagacgaggtttagaaaagctgttactagga
aggactattttgtcacttgaagttaaggtccctaaaatgatcaagacatcatacgatagt
tttttgcatgatttgcctggtcagacgattcaagccatgcgacgtaggggaaagtatctc
atttttgattttggtcagttgataataatttctcacttacgcatggagggaaaatatctg
ctgttcacagaccaggttcctgacaacaaacattttcacctcttttttaagctagatgat
ggctcaaccctagtttatcaggatgtacgtaagtttgggacttttgatttattggatagg
aaacaagaagaggcctattttacaaggaaaaaacttggccctgagcctaccaagaagacc
tttaaatatgtaccgtttgagagagccttaatgcattctggcaagtctattaagccctta
ctcttggagcagaagttagtagccggtctaggaaatatctacgttgatgaggtgctttgg
gcagccaaggttcatcctgagacaccagcaaataaacttagcaaggcagccatgaaacgg
gttcacgatcaaacgattgccattttacagctggggattgctaagggtggttccactata
aggacctatcgtaacgcccttggtgaggatgggaccatgcagaattatctacaggtttat
ggaaagacaggtcaaccttgtccacgttgcgcaagcatgattgtgaaaatcaagttagga
ggaagaggaacacatttgtgtcctcattgtcaaaaacgatga

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