KEGG   Sporolactobacillus terrae: C0679_07470
Entry
C0679_07470       CDS       T05792                                 
Name
(GenBank) ATP-dependent helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
stea  Sporolactobacillus terrae
Pathway
stea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C0679_07470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stea03019]
    C0679_07470
   03009 Ribosome biogenesis [BR:stea03009]
    C0679_07470
Enzymes [BR:stea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C0679_07470
Messenger RNA biogenesis [BR:stea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C0679_07470
Ribosome biogenesis [BR:stea03009]
 Prokaryotic type
  rRNA helicases
   C0679_07470
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Helicase_RecD AAA_19
Other DBs
NCBI-ProteinID: QAA25453
UniProt: A0A410D8S5
Position
1564189..1565631
AA seq 480 aa
MKFSELEISQEVKKATERMGFTDMTPIQEQAIPVAETGVDLIGQAQTGTGKTTAFGIPMI
EAADPHNSDIQGVVITPTRELAIQNAQELNALGFYKKVRTVAIYGGQDIQRQIRDLKRRP
SIISATPGRLLDHIKRRTIRLDQIKVVVLDEADEMLNMGFIEDIHAILEATPENRQTLLF
SATMPRPIQVLAEKFMHEPKKIQIKAKTLTTSLIDQSYVKVRELEKFDALTRFLDIQSPE
RAIVFGRTKRRVDELMRALQKRGYEAEGIHGDLTQSKRDLVLRRFKQNEVKLLVATDVAA
RGLDISNVTHVYNFDLPQDPESYVHRIGRTGRAGKTGMALTFITPSEFPHLRSIERLTKQ
PMKQLNAPSYEEALAGQQKIAIDNLKEMIESGKYRSYAAKAQDLLDEFDATDVLAAALKL
ITKEPDTTPVRLTREQPLMVKRSNRQQRGGGRGRNNYRSHDRDRRNNNYRGRSKQKSQHY
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaaattttcagaactcgaaatcagtcaagaagtaaagaaagcaaccgagcgaatgggg
tttaccgatatgactccaattcaggaacaagcgattccggttgcggaaacaggtgttgac
ctgatcggtcaagcacaaacgggtacaggaaaaacaactgcatttggtatcccgatgatc
gaagcagccgatccccacaactcggatattcaaggagttgtcattacaccgacgcgtgaa
cttgcgattcagaatgctcaagaacttaacgcgctcggcttttataaaaaggtcagaacg
gttgcgatttatggtggtcaagatatccagcggcaaatccgtgatttgaaaaggcgtcca
agtattatttcggcaactcctggacgattgctcgaccacatcaagagaagaacaattcgc
ttggatcagatcaaggtagttgtgcttgatgaagcagatgaaatgttgaacatgggcttt
atcgaagatattcatgcgattttggaagctacaccggagaatcgtcaaaccttgctgttc
tcagcaacgatgccgagaccgattcaagtgctggctgagaaattcatgcatgaacctaaa
aaaattcagatcaaagcaaagaccctaacgacgtcattaattgatcaaagctatgttaag
gttcgtgagcttgaaaaatttgatgctctgacacgttttcttgatattcaatcgcctgaa
cgggcaattgtctttggtcggacaaaacgacgcgtcgacgaactgatgcgtgcgttgcaa
aaaagaggctatgaggcagaaggaattcacggcgatctgactcagtcaaaacgtgatctt
gttctgcgacgttttaaacagaatgaagtgaaactgctggttgctacggatgtggcggca
cgcggacttgatattagcaacgtgacgcatgtctacaactttgatcttccgcaagacccg
gaaagctatgtacaccggatcggccgtacaggacgcgctgggaaaaccggaatggcactc
acttttattacgccgagtgaattcccgcatctgagatcgattgaacgtttgacgaaacag
ccaatgaaacaactcaatgcaccaagctatgaagaagcattagcgggacagcagaaaatt
gctattgacaatttaaaagaaatgattgaatccggaaaataccgtagctatgcagcaaag
gctcaagatctgcttgatgaatttgatgcaacggatgtgctcgctgcagcccttaagctg
attactaaagagccggatacaactccggtacgtttaacccgtgaacaaccgctcatggtt
aaacgatcaaatcggcagcaacgaggcggcggaagaggtcgcaacaattaccgttcacat
gatcgtgatcgtcgaaacaacaattatcgcggaagaagcaaacaaaaatcacagcattat
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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