KEGG   Sporolactobacillus terrae: C0679_09885
Entry
C0679_09885       CDS       T05792                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
stea  Sporolactobacillus terrae
Pathway
stea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    C0679_09885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stea03400]
    C0679_09885
Enzymes [BR:stea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C0679_09885
DNA repair and recombination proteins [BR:stea03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C0679_09885
    RecFOR pathway proteins
     C0679_09885
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_16 nSTAND3 AAA_3 RNA_helicase AAA_25 AAA_14 DUF815 TsaE Resolvase DUF1400 AAA_18 NB-ARC AAA_24 IstB_IS21 NACHT cIII
Other DBs
NCBI-ProteinID: QAA25884
UniProt: A0A410DA16
Position
complement(2047612..2048616)
AA seq 334 aa
MEEDHLLSRDALLEDQGLDQSIRPSDLDHYIGQEELKRNLKIFIRAAKARQEPLDHVLLY
GPPGLGKTTLSMIIATEMGAGIRTTSGPALERPGDLAAVLSSLEPGDVLFIDEIHRLPRH
VEEILYPAMEDFCMDIMIGKDETAHSVRLNLPPFTLVGATTRAGYLSPPLRDRFGVIHRL
QFYTPEELSMIINRTAGVLKTEIAENACIEIARRSRGTPRIANRLLKRIRDFAQVENNGM
IDQQTARDGLTRLHVDEAGLDRVDRQLILGIINQFNGGPVGLDTLAASIGEDRHTIEDVQ
EPYLLQIGFIQRTPRGRIVTDQAYRHFHCKREDE
NT seq 1005 nt   +upstreamnt  +downstreamnt
ttggaagaggatcatctgctttcgcgtgatgcgttgcttgaagatcaagggctggaccaa
tccattcgtccttccgacttagatcattatatcggtcaggaagaactgaagcggaatctt
aaaatctttatacgtgctgcaaaagcgcggcaggaaccgcttgatcatgttcttctctat
ggacccccggggctaggaaaaacgacgctttcaatgattatcgcaacggagatgggtgca
ggaattcgcaccacttccggcccggcactggaacgacctggcgacctagctgcggtgctc
tcatccttggaaccgggcgatgttctttttattgacgaaattcaccggctgccgcgccat
gttgaagaaattctgtatccggcgatggaagacttttgcatggatatcatgattggaaaa
gatgaaaccgcgcattcggttcggctgaacttgccgccgtttaccttagttggggctacg
acacgtgccgggtatctgtctccgccgcttcgcgatcgttttggcgtgattcaccgcctg
cagttttatacaccggaagaattgtctatgattattaacagaacggcaggtgtattgaaa
acagaaattgccgagaatgcctgcattgaaattgccagacgttcgcgcggtacgccgaga
attgctaatcgcctgttgaaacggattcgcgactttgcacaagttgaaaacaatggcatg
attgatcagcagacggcgcgagatgggcttacgcgactgcatgttgatgaagcaggactc
gatcgtgttgatcgtcaactgattctggggataatcaaccaatttaatggcggaccggtc
ggtttagatactcttgccgcatcaattggcgaggatcggcatacgatcgaagacgttcaa
gagccgtacttgctgcagattggatttattcagcgcacaccgcgcggacggattgtgacc
gaccaagcgtaccggcattttcattgtaaacgagaggacgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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