KEGG   Sporomusa termitida: SPTER_18060
Entry
SPTER_18060       CDS       T06115                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
sted  Sporomusa termitida
Brite
KEGG Orthology (KO) [BR:sted00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sted03032]
    SPTER_18060 (topA)
   03400 DNA repair and recombination proteins [BR:sted03400]
    SPTER_18060 (topA)
Enzymes [BR:sted01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SPTER_18060 (topA)
DNA replication proteins [BR:sted03032]
 Prokaryotic type
  DNA Topoisomerases
   SPTER_18060 (topA)
DNA repair and recombination proteins [BR:sted03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SPTER_18060 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-C4_Topoisom Zn_ribbon_recom Toprim_4 CheR_N
Other DBs
NCBI-ProteinID: QDR80478
UniProt: A0A517DT35
Position
1952205..1954400
AA seq 731 aa
MSKALVVVESPAKAKTIEKFLGKNYTVKASMGHLRDLPKSQFGVNIEQGFEPKYINIRGK
GDLIKSLKEAAKNADTVYLATDPDREGEAIAWHLAHILNIPEHSTCRIEFNEITKPAIQQ
AVKKPRPINLPRVYAQQTRRILDRIVGYKLSPLLWRKVRKGLSAGRVQSVAVRLICDREK
EIQAFVPEEYWTITAKLKEKNNAKGFDAELVAVDGTKPSVTNELQAAGIVDDLKKAEYVV
SDVKKRERKRNPYPPFTTSTLQQEAARKLGFTSRKTMMVAQQLYEGLDIGRAGQVGLITY
MRTDSTRVADTAQQEARTYVEQKFGLDYLPAKAPVYANKKSQDAHEAVRPTTLELAPAAI
DKNLSKDQLKLYTLIWERFIASQMTAAVYDTLTIEITAGRYKLKATGSQLKFPGFLAAFS
GMIGKGKEIEQTADSDLDHETTLPVLTPGQIVKLSKIDPKQHFTEPPPRYTEASLVKMLE
EKGIGRPSTYAPTIETIVDRGYVERVEKRFFPTELGFVVLDLLKQYFDKIVDAEFTAGME
DKLDDIAEGDASWLSVLEQFYGPFAKDLSFAEEAIGQVELPVEVSDIPCENCGRMMVVKQ
GRYGNFLACPGFPACRNTKPILKDTGVKCPKCKGAIVERRTKRRRVFYGCENYPECDFNT
WDMPLKENCQVCGAFMVRHRYKNGGVAAVCSNEACSTRQSPEHKAVPEKTGDDEKQAKAK
KPAANRRKKSG
NT seq 2196 nt   +upstreamnt  +downstreamnt
gtgagcaaagctctagttgtggtagaatccccggccaaagccaaaacaatagaaaagttt
ttaggtaaaaactatacagtcaaagcttctatgggacacttgcgtgatttgcctaaaagc
cagtttggtgttaatattgagcagggctttgagcctaaatacattaacatcagaggcaag
ggcgatcttattaaaagcctgaaagaagcagcaaaaaatgccgatacagtatatctggcg
acagaccctgaccgtgaaggggaagccattgcctggcatttagcgcacatccttaatatt
ccggagcatagtacctgccggattgaatttaatgaaattaccaaaccggccattcagcag
gctgttaaaaagccgcgccccatcaacctgccccgggtttatgcgcaacagaccaggcgg
atacttgacagaattgtgggttacaagctgagtccccttttatggcgcaaagtccgcaaa
ggccttagtgccggccgggttcagtcggttgctgtcaggctaatttgcgacagggagaaa
gagattcaggcctttgtgccggaagagtattggacgataaccgctaaactcaaagaaaag
aataatgccaaaggttttgatgctgaactagttgccgttgacggtaccaagccgtcggtt
actaatgagctgcaggcggctggtattgtcgatgatttaaaaaaagctgaatatgtggtc
agtgatgttaaaaagcgggaaagaaagcgtaatccctatccgccgtttaccaccagcacc
ctccagcaggaggcggcccgcaaactgggctttacatcccggaaaacgatgatggttgct
cagcaattatatgaaggcctggatattggccgtgccggtcaagtcggtcttattacttat
atgcggactgattcaacccgggtagccgacaccgctcagcaagaggcaagaacctatgtt
gagcagaaatttggtttggattatctgccggccaaagcgccggtgtatgccaataaaaaa
tcccaggatgcccatgaggcggtcaggcccactaccctggagctggctccggctgcgatt
gataaaaatctcagcaaagatcaactaaaattgtatacgcttatttgggaaagatttatt
gccagccagatgactgccgccgtctatgacactctgaccatagagattactgccggccgg
tataagctgaaagctacgggttcgcagcttaagttccccggttttttagcagcgttcagc
gggatgattggtaagggcaaggaaatagaacaaacagccgacagcgatctggatcatgag
actactttgcctgttctcaccccggggcagatcgttaaattaagtaaaattgaccccaag
cagcattttaccgaaccgccgccccgctataccgaggcatcactggttaaaatgctggag
gaaaaagggattggccggcctagtacgtacgctccgacaatagagacgattgttgaccgg
gggtatgtggagcgggttgagaaaagattttttcccaccgagctgggttttgtagtactt
gatctgttgaagcagtattttgataaaattgttgatgctgaatttacggccggtatggaa
gataaattagatgatattgctgaaggcgatgcatcctggttaagtgttttagaacaattt
tatggcccttttgccaaagatctaagttttgccgaagaagcaatcgggcaggttgaactg
cctgttgaagtatctgatattccctgtgagaattgtgggcggatgatggttgttaagcag
ggacggtatgggaatttcctggcctgcccgggttttccagcctgccgcaacactaaacct
attttaaaagacaccggcgtaaagtgcccgaaatgcaagggggctattgttgaacgccgg
accaaacggcgccgggttttttatggttgtgaaaactatccggaatgcgattttaatacc
tgggatatgccgttaaaggagaattgccaggtgtgcggcgcctttatggtgcggcacaga
tataagaatggcggtgttgccgccgtgtgcagcaacgaagcctgctcaacccggcaatca
cctgagcataaagcggtgcctgaaaaaacaggcgatgatgagaaacaggccaaagccaag
aagcctgctgctaaccggaggaaaaaaagtggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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