KEGG   Stenotrophomonas sp. MYb57: CLM74_02790
Entry
CLM74_02790       CDS       T05384                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
stem  Stenotrophomonas sp. MYb57
Pathway
stem00521  Streptomycin biosynthesis
stem00523  Polyketide sugar unit biosynthesis
stem00525  Acarbose and validamycin biosynthesis
stem00541  O-Antigen nucleotide sugar biosynthesis
stem01100  Metabolic pathways
stem01110  Biosynthesis of secondary metabolites
stem01250  Biosynthesis of nucleotide sugars
Module
stem_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:stem00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CLM74_02790 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CLM74_02790 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CLM74_02790 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CLM74_02790 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CLM74_02790 (rfbB)
Enzymes [BR:stem01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CLM74_02790 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD adh_short NAD_binding_4 NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: AVJ31780
Position
613551..614606
AA seq 351 aa
MPTWLVTGGAGFIGGNFVLEAVARGVKVINLDVLTYAGNLKTLSSLDGNPNHVFVQGDIG
DSALVSRLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
DQGVAFRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLTK
GQVGETYNVGGNSEKQNIEVVQAICALLDQRRPRADGQPRSSQITYVADRPGHDRRYAID
ASKLKNDLGWEPAYTFEQGIGFTVDWYLDNQEWVNGVLDGSYRLQRIGTAA
NT seq 1056 nt   +upstreamnt  +downstreamnt
gtgcccacatggcttgtcaccggcggcgccggattcattggcggtaacttcgttctcgag
gccgtcgcacgcggcgtcaaggtcatcaacctcgatgtgctgacctacgccggcaacctg
aagaccctgtccagcctggacggcaatcccaaccacgtgttcgtccagggtgacatcggc
gacagcgcgctggtttcacgcctgctggccgagcaccagcccgatgcggtgctgaacttc
gcggccgaaagccacgtcgaccgttccatcgacggcccgggcgcgttcatccagaccaat
gtcgtcggcactctcggcctgctcgaggctgtgcgcgattactggaaggcgctgccggcc
gatcagggcgtggccttccgcttcctgcatgtctccaccgacgaggtgtacggcaccctg
ggggagaccggcaagttcagcgaaaccaccccgtatgccccgaactcgccgtactcggcg
tccaaggccgcctcggaccatctggtgcgtgcgttccaccatacctacgggctgccggtg
ctgaccaccaactgctccaacaactacggtccgtaccacttcccggagaagctgatcccg
ctggtgatcgccaaggcgctggccggtgagccgctgccggtgtacggcgatggcaagcag
gtgcgtgattggctgttcgtgtccgaccactgcgaagcgatccgtaccgtgctgaccaag
ggccaggtgggcgagacctacaacgtcggcggcaactccgaaaagcagaacatcgaagtg
gtgcaggcgatctgcgcgctgctggaccagcgccgcccgcgtgcggacggccagccgcgc
agcagccagatcacctacgttgccgaccgcccgggccatgaccgccgttacgcgatcgat
gcctcgaagctgaagaacgacctgggctgggaaccggcctacacctttgaacagggcatc
ggcttcaccgtcgactggtacctggacaaccaggaatgggtgaacggcgtgctcgacggc
agctaccgcctgcagcgcatcggcaccgcggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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