KEGG   Sphingopyxis terrae: AOA14_09375
Entry
AOA14_09375       CDS       T04307                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ster  Sphingopyxis terrae
Brite
KEGG Orthology (KO) [BR:ster00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ster03032]
    AOA14_09375
   03400 DNA repair and recombination proteins [BR:ster03400]
    AOA14_09375
Enzymes [BR:ster01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AOA14_09375
DNA replication proteins [BR:ster03032]
 Prokaryotic type
  DNA Topoisomerases
   AOA14_09375
DNA repair and recombination proteins [BR:ster03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AOA14_09375
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: AMU94811
UniProt: A0A142VYI7
Position
complement(1942125..1944674)
AA seq 849 aa
MTDTPASGASESAPKQPNQNSYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLVLITLNSDGSVSVEDNGRGIPTGIHAEEGISAAEVIMTQLHAGGK
FENTSDDNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGEEHWMRFEHGDSVAPLKVNGP
APAGKKGTRVTFMASTDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLVDARHAEHVVHD
LFYEGGIAAFVKYLDRNKNPLLPDPIAISSERDGIGIDVALEWNDSYYENVLCFTNNIPQ
RDGGTHLAAFRAALTRTLNGYGEKSGLLKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQ
TKDKLVSSEVRQPLESLMADRMTEWLEENPAYAKAVIQKVIDAAAAREAAKKARELTRRK
GAMDIASLPGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRHVQAILPLKGKILNVER
ARFDRIISSKEVGTLIQALGTGIRDEFNIEKLRYHKIVIMTDADVDGAHIRTLLLTFFYR
QMPEIIENGHLYIAQPPLYKVAKGRSEVYLKDDTALENYLVDAGIDALMLETPGGARSGN
DLRGLIEHGRRLRALMRYVPRTLDHGLVEALALVGALDPALDTAGRHSAAATAANWLNAA
ERALTGGAEAVWTVEAVEGGGYTLERRWRGVSDHHAIDAGFLASQEARRLHKLAAEQAET
YGGPGRLVKASAATVVEADSDAEGEDGEAPTAASAAKAVPVTRPSELLDAIFTHSRRGLS
ISRYKGLGEMNAEQLWETTLDPANRSLLRVEAEQADVAHEIFERLMGDEVEPRRDFIQTN
ALSVANLDV
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgacagacacccccgcgagcggcgcgagcgaaagcgcccccaagcagcccaatcagaac
agctacggcgccgattcgatcaaggtgctgaaaggcctcgatgcggtgcgcaagcggcct
ggcatgtatatcggcgacaccgacgacgggtcgggtctgcatcatatggtcttcgaagtc
agcgacaatgcgatcgacgaggcactcgccggccattgcgatctggtactcatcacgctc
aacagcgacggatcggtcagcgtcgaggacaatggacggggcatcccgaccggcatccat
gccgaggaaggcatttcggcggccgaggtcatcatgacccagcttcacgcgggcggtaag
ttcgagaacacgagcgacgacaatgcctataaggtgtcgggcggtctgcacggcgtcggc
gtatcggtcgtcaatgcgctcagcgaatggctcgaactgacgatctggcgcgatggcgaa
gagcattggatgcgcttcgagcatggcgattcggttgcgccgctcaaggtcaacgggccg
gcgcctgcgggcaagaagggcacccgcgtcaccttcatggcatcgaccgataccttcaag
aatgtcaccgagttcgatttcgaaaagctggaacatcgctatcgcgagctcgcttttctc
aattccggcgtgaggatcaagctggtcgatgcccgccacgccgaacatgtcgtccacgac
ctgttctacgagggcgggattgcggctttcgtcaaatatctcgaccgcaacaagaatccg
ctgctgcccgatccgatcgcgatcagcagcgaacgcgacggcatcggcatcgacgtcgcg
ctcgagtggaacgacagctattatgaaaatgtcctctgcttcacgaacaatatcccgcag
cgcgacggcggcacccacctcgccgctttccgcgcggcgctgacgcgcacgctcaacggc
tatggcgaaaaatcgggcctgctgaagaaggaaaaggtcagcctgaccggcgaggatatg
cgcgaaggcttgaccgcgatcgtctcggtcaagctgcccgatccgaagttttcctcgcag
accaaggacaagcttgtctcgtcggaagtgcgccagccgctcgaaagcctgatggccgac
cggatgaccgaatggctcgaggaaaatcccgcctatgccaaagcggtgatccagaaggtg
atagacgccgccgcggcgcgcgaggccgcgaagaaggcgcgcgaattgacccggcgcaag
ggcgcgatggatatcgcgagcctgcccggcaagcttgccgactgtcaggaacgcgacccc
agcaagtgcgaactcttcctcgtcgaaggggattcggcaggcggcagcgccaagcagggc
cgcgaccggcatgtgcaggccattctgccgctgaagggcaagatcttgaacgtcgagcgg
gcgcgcttcgaccgcatcatttcgtcgaaggaagtcggcacgctgattcaggcgctcggc
accgggatccgcgacgaattcaacatcgaaaagctgcgctatcacaagatcgtgatcatg
accgacgccgacgtcgacggcgcgcatatccgcacgctgctgctcaccttcttctaccgc
cagatgcccgagatcatcgagaatggccacctctacattgcccagccgccgctctacaaa
gtcgcaaaggggcgcagcgaggtgtatctgaaggatgacaccgcgctcgaaaattacctc
gtcgatgccggaatcgacgcgctgatgctcgaaacgccgggcggcgcacggtcgggtaac
gatctgcgcggcctgatcgagcatggccgacggctccgcgcgctgatgcgttacgtcccc
cgcacgctcgatcatgggctggtcgaggcactggcgctggtcggcgccctcgatcccgcg
ctcgatacggcaggacgccacagcgctgcggcaactgccgcgaactggctcaatgccgct
gagcgcgcgctgaccggcggcgccgaagcggtgtggaccgtcgaggcggtcgaaggcggc
ggctatacgctcgaacgccgctggcgcggggtgagcgatcatcacgcgatcgacgccggt
ttcctcgcgagccaggaggcgcgccgccttcacaaactcgccgccgaacaggccgaaacc
tatggtggccccggacggctggtgaaagccagcgctgctacggtcgtcgaggccgacagc
gatgccgagggcgaggatggcgaggcaccgaccgccgcgagcgccgcaaaggccgtgccg
gtgacgcggccgtccgaattgctcgatgccatcttcacgcacagccgccgcggcctgtcg
atcagccggtacaagggactgggcgagatgaatgccgagcaattgtgggaaaccacactc
gatcccgccaaccgctcgctgctgcgcgtcgaggccgaacaggccgatgtcgcgcatgaa
atcttcgagcggctgatgggcgacgaggtcgagccgcggcgcgatttcatccagaccaac
gcgctgtcggttgccaatctggacgtctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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