KEGG   Stenotrophomonas sp. ASS1: MG068_07745
Entry
MG068_07745       CDS       T06051                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
stes  Stenotrophomonas sp. ASS1
Pathway
stes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:stes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MG068_07745 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stes03019]
    MG068_07745 (pcnB)
Enzymes [BR:stes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     MG068_07745 (pcnB)
Messenger RNA biogenesis [BR:stes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     MG068_07745 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd DUF6448
Other DBs
NCBI-ProteinID: QBL40401
Position
1657257..1658636
AA seq 459 aa
MGNPETSTGSANIISSATSPFSLRVIPRDQHTISRKDISPNALRVLYRLRDAGFGAYLVG
GAVRDLLVNGQPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
SDDGSGDREMENGMLVRDNVYGTIEDDAIRRDFTCNALYYAIEDFSVRDYTGGFEDVQAR
LMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEGTAAPIPHLAGLLNEAAPARLFEEV
LKLFLSGHGVASFEGLERYGLLDVLFPESAKALKSNRTGALRRMLVEGLANTDARVANDE
PVSPAFLFALLLWPAFCRAQATLLKQGVAPEEAQRRAADRVTVQQLSTIALPRRFSLPMQ
EIWLLQSRFSSRQRKRVFRTLTHPRFRAAFDFLSLRQVASAEHAADVEFWREAQAQSGRE
LESSLDVMHSEDGDDESGAPRKRRRRRRRPGAPAGAAGE
NT seq 1380 nt   +upstreamnt  +downstreamnt
ttgggcaatcccgaaacttcaaccggaagcgccaacatcatttcctctgctacatcaccg
ttcagcctgcgcgtcatcccgcgcgaccagcacacgatctcccgcaaggacatcagcccg
aacgccctgcgcgtgctttatcgcctgcgcgatgccggcttcggcgcctaccttgtcggc
ggcgcggtgcgcgatctgctggtcaatggccaacccaaggatttcgacgtggccaccgac
gccacgcccgaacaggtcaagcagctgttccgcaactgccgcctgatcggtcgccggttc
cgcctcgcccacgtcgtgttcggccgcgagatcatcgaagtcgccaccttccgtgccaac
agcgatgacggcagcggcgaccgcgagatggaaaacggcatgctcgtgcgcgacaacgtg
tacggcaccatcgaagacgacgccatccgccgcgacttcacctgcaacgccctgtactac
gccatcgaggacttctcggtgcgcgattacaccggcggcttcgaggacgtccaggcgcgc
ctgatgaagctgatcggcgaccccgagcagcgttatcgcgaagatccggtgcgcatgctg
cgtgcggtgcgcctggcggccaaactcggcttccagatcgaagagggcaccgccgcgccg
atcccgcacctggcgggcctgctcaacgaagccgcaccggcgcgcctgttcgaggaagtg
ctcaagctgttcctgtccgggcacggcgtggccagcttcgaaggccttgagcgctacggc
ctgctggacgtgctgttccctgaaagcgccaaggcgctgaagtccaaccgcaccggcgcg
ctgcgccgcatgctggtggagggcctggccaacaccgatgcacgcgtggccaacgatgaa
ccagtctcgcccgcgttcctgtttgcgctgctgctgtggccggcgttctgccgggcccag
gcaaccctgctcaagcagggcgtggcaccggaagaggcgcagcgccgtgcggccgaccgc
gtcacggtgcagcagctgagcaccatcgcgctgccgcgccgcttctcgctgccgatgcag
gaaatctggctgctgcagtcgcgcttcagctcgcgccagcgcaagcgcgtgttccgtacc
ctgacccatccgcgcttccgcgctgcgttcgacttcctcagcctgcgccaggtggcctcg
gccgagcacgccgccgatgtcgagttctggcgtgaggcgcaggcgcagtccggtcgcgag
ctggaatcgtcgctggacgtgatgcacagcgaagacggggatgacgagagcggggcaccg
cgcaagcgccgccgtcgccgccgtcgtccgggtgccccggccggcgcggctggcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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