KEGG   Stenotrophomonas sp. ASS1: MG068_20455
Entry
MG068_20455       CDS       T06051                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
stes  Stenotrophomonas sp. ASS1
Pathway
stes03420  Nucleotide excision repair
stes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:stes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MG068_20455
   03430 Mismatch repair
    MG068_20455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stes03400]
    MG068_20455
Enzymes [BR:stes01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MG068_20455
DNA repair and recombination proteins [BR:stes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MG068_20455
   MMR (mismatch excision repair)
    Other MMR factors
     MG068_20455
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: QBL42764
Position
complement(4435682..4437874)
AA seq 730 aa
MDVSHLLDGLNPAQREAVSAPPGHHLVLAGAGSGKTRVLTHRIAWLHEVDGVPTHGIFAV
TFTNKAAGEMRHRIDAQLPNGSRGMWIGTFHGLANRLLRLHWQDAKLPEGFQVMDSDDQL
RLVKRVVQALELDDGKYPAKQIAWWINAQKDEGRRPQHIQPEPHDAWLETMRQAYIEYQA
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQGFLRDFPGAQTIRLEQNYRSTANILGAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEMDEARYIVERARQWVRDGGSYTEAAVLYRSNAQ
SRALEEALLSEQVPYRVYGGMRFFERAEIKDALAYLRLLSNRNDDAAFERAVNTPTRGIG
DRTLDEVRREARAQGISLWEATMLVTQGSALAARARNALAGFLVLVNELQAQTVHMTLAE
RVDHVLARSQLREHWSKESRNALDSESRTDNLDELVSVASRFVRRADDIEEVGEDMDELV
AFLAYAALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSARSLEESGRL
EEERRLAYVGITRARQKLVLSYAESRRIHGQDNYSLPSRFLREIPRELLHEVRPKVQVSR
PASMGASRVMGHASIEAPPIKLGALVTHPKFGEGMVTDYEGNGAHARVQVEFADAGSKWL
VMAYANLTVI
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggatgtctcccacctgcttgatggcctgaacccggcccagcgcgaagccgtctccgct
ccccccggccaccacctggtgctggccggtgccggttccggcaagacccgcgtactcacc
caccgcatcgcctggctgcatgaagtcgatggcgtgccgacccacggcattttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgccaccgcatcgacgcacagctgcccaat
ggcagccgtggcatgtggatcggcaccttccacggcctggccaatcgcctgctgcgcctg
cactggcaggacgcgaagctgcccgaaggcttccaggtgatggactcggacgaccagctg
cggctggtcaagcgggtggtgcaggcgctggaactggacgacggcaagtacccggccaag
cagatcgcgtggtggatcaacgcgcagaaggacgagggtcgccgcccgcagcacatccag
cccgagccgcacgacgcctggctggaaaccatgcgccaggcctacatcgagtaccaggca
cgctgcgaccgcgccggcctggtcgacttcgccgagctgctgctgcgcgcgcacgaactg
ctgcgcgacaacccggccctgctggcgcactaccgcgcgcgcttccgcgaaatcctggtg
gacgagttccaggacaccaatgccatccagtacgccttcgtgcgcgtgctggccggcgat
tccggtcacgtgttcgtggtcggcgacgatgaccaggccatctacggctggcgcggcgcc
aaggtcgagaacgtgcagggcttcctgcgcgacttcccgggcgcgcagaccatccgcctg
gaacagaactaccgctccaccgccaacatcctcggcgccgccaatgcggtgatcgcgcac
aaccccgaccgcatcggcaagcagctgtggaccgacagtggcgacggtgagccgatcgac
ctgtacgccgcctacaacgagatggacgaggcacgctacatcgtcgagcgcgcgcgccag
tgggtgcgtgacggtggaagctataccgaagcggccgtgctctaccgcagcaatgcgcag
tcgcgcgcgctggaagaagcgctgctgagcgaacaggtgccgtaccgcgtgtacggcggc
atgcgtttcttcgagcgcgccgaaatcaaggacgcgctggcctacctgcgcctgctgtcc
aaccgcaacgatgacgccgccttcgagcgcgcggtcaacacgcccacccgtggcatcggc
gaccgcacgctggacgaagtgcgccgcgaggcgcgcgcgcagggtatttcgctgtgggaa
gcgaccatgctggtcacccagggcagcgcgctggccgcgcgtgcgcgcaatgcgctggcc
ggcttcctggtgctggtcaacgagctgcaggcgcaaaccgtgcacatgaccctggccgag
cgcgtggaccacgtgctggcccgctcgcagctgcgcgagcactggagcaaggaaagccgc
aacgcgctggactcggaatcgcgcaccgacaacctcgacgaactggtctcggtagcctct
cgcttcgtgcgtcgcgccgatgacatcgaggaagtgggcgaggacatggacgagctggtc
gcgttcctggcctatgccgcgctggaggccggtgagggccaggcgcaggcgggcgaggac
ggcgtgcagctgatgaccctgcactcggccaagggcctggagttcccgctggtgttcctg
gccggcctggaagaaggcctgttccccagtgcacgctcgctggaggaaagcgggcggctg
gaagaagagcgccgcctggcctacgtcggcatcacccgcgcgcgccagaaactggtgctg
agctacgccgaatcgcgccgcatccacggccaggacaactacagcctgccgtcgcgcttc
ctgcgcgagattccccgcgagctgctgcacgaagtccgcccgaaggtgcaggtctcgcgg
ccggcctcgatgggcgccagccgggtgatgggccatgcctcgatcgaggcaccgccgatc
aagctcggcgcactggtcacccatcccaagttcggcgaaggcatggtgaccgactacgaa
ggcaacggcgcccacgcccgcgtgcaggtcgagtttgccgatgccggcagcaagtggctg
gtgatggcgtatgccaacctgacggtgatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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